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Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))

Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family ‘Alicyclobacillaceae’. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic n...

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Autores principales: Mavromatis, Konstantinos, Sikorski, Johannes, Lapidus, Alla, Glavina Del Rio, Tijana, Copeland, Alex, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick, Meincke, Linda, Sims, David, Chertkov, Olga, Han, Cliff, Brettin, Thomas, Detter, John C., Wahrenburg, Claudia, Rohde, Manfred, Pukall, Rüdiger, Göker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Klenk, Hans-Peter, Kyrpides, Nikos C.
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035248/
https://www.ncbi.nlm.nih.gov/pubmed/21304673
http://dx.doi.org/10.4056/sigs.591104
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author Mavromatis, Konstantinos
Sikorski, Johannes
Lapidus, Alla
Glavina Del Rio, Tijana
Copeland, Alex
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Meincke, Linda
Sims, David
Chertkov, Olga
Han, Cliff
Brettin, Thomas
Detter, John C.
Wahrenburg, Claudia
Rohde, Manfred
Pukall, Rüdiger
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Klenk, Hans-Peter
Kyrpides, Nikos C.
author_facet Mavromatis, Konstantinos
Sikorski, Johannes
Lapidus, Alla
Glavina Del Rio, Tijana
Copeland, Alex
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Meincke, Linda
Sims, David
Chertkov, Olga
Han, Cliff
Brettin, Thomas
Detter, John C.
Wahrenburg, Claudia
Rohde, Manfred
Pukall, Rüdiger
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Klenk, Hans-Peter
Kyrpides, Nikos C.
author_sort Mavromatis, Konstantinos
collection PubMed
description Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family ‘Alicyclobacillaceae’. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic nature, several enzymes from this species have since long been subjected to detailed molecular and biochemical studies. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family ‘Alicyclobacillaceae’. The 3,205,686 bp long genome (chromosome and three plasmids) with its 3,153 protein-coding and 82 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352482011-02-08 Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) Mavromatis, Konstantinos Sikorski, Johannes Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Meincke, Linda Sims, David Chertkov, Olga Han, Cliff Brettin, Thomas Detter, John C. Wahrenburg, Claudia Rohde, Manfred Pukall, Rüdiger Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family ‘Alicyclobacillaceae’. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic nature, several enzymes from this species have since long been subjected to detailed molecular and biochemical studies. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family ‘Alicyclobacillaceae’. The 3,205,686 bp long genome (chromosome and three plasmids) with its 3,153 protein-coding and 82 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035248/ /pubmed/21304673 http://dx.doi.org/10.4056/sigs.591104 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Mavromatis, Konstantinos
Sikorski, Johannes
Lapidus, Alla
Glavina Del Rio, Tijana
Copeland, Alex
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Meincke, Linda
Sims, David
Chertkov, Olga
Han, Cliff
Brettin, Thomas
Detter, John C.
Wahrenburg, Claudia
Rohde, Manfred
Pukall, Rüdiger
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Klenk, Hans-Peter
Kyrpides, Nikos C.
Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
title Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
title_full Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
title_fullStr Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
title_full_unstemmed Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
title_short Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
title_sort complete genome sequence of alicyclobacillus acidocaldarius type strain (104-ia(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035248/
https://www.ncbi.nlm.nih.gov/pubmed/21304673
http://dx.doi.org/10.4056/sigs.591104
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