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Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T))
Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family ‘Alicyclobacillaceae’. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic n...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035248/ https://www.ncbi.nlm.nih.gov/pubmed/21304673 http://dx.doi.org/10.4056/sigs.591104 |
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author | Mavromatis, Konstantinos Sikorski, Johannes Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Meincke, Linda Sims, David Chertkov, Olga Han, Cliff Brettin, Thomas Detter, John C. Wahrenburg, Claudia Rohde, Manfred Pukall, Rüdiger Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
author_facet | Mavromatis, Konstantinos Sikorski, Johannes Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Meincke, Linda Sims, David Chertkov, Olga Han, Cliff Brettin, Thomas Detter, John C. Wahrenburg, Claudia Rohde, Manfred Pukall, Rüdiger Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
author_sort | Mavromatis, Konstantinos |
collection | PubMed |
description | Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family ‘Alicyclobacillaceae’. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic nature, several enzymes from this species have since long been subjected to detailed molecular and biochemical studies. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family ‘Alicyclobacillaceae’. The 3,205,686 bp long genome (chromosome and three plasmids) with its 3,153 protein-coding and 82 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035248 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352482011-02-08 Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) Mavromatis, Konstantinos Sikorski, Johannes Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Meincke, Linda Sims, David Chertkov, Olga Han, Cliff Brettin, Thomas Detter, John C. Wahrenburg, Claudia Rohde, Manfred Pukall, Rüdiger Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family ‘Alicyclobacillaceae’. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic nature, several enzymes from this species have since long been subjected to detailed molecular and biochemical studies. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family ‘Alicyclobacillaceae’. The 3,205,686 bp long genome (chromosome and three plasmids) with its 3,153 protein-coding and 82 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035248/ /pubmed/21304673 http://dx.doi.org/10.4056/sigs.591104 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Mavromatis, Konstantinos Sikorski, Johannes Lapidus, Alla Glavina Del Rio, Tijana Copeland, Alex Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Meincke, Linda Sims, David Chertkov, Olga Han, Cliff Brettin, Thomas Detter, John C. Wahrenburg, Claudia Rohde, Manfred Pukall, Rüdiger Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) |
title | Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) |
title_full | Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) |
title_fullStr | Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) |
title_full_unstemmed | Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) |
title_short | Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA(T)) |
title_sort | complete genome sequence of alicyclobacillus acidocaldarius type strain (104-ia(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035248/ https://www.ncbi.nlm.nih.gov/pubmed/21304673 http://dx.doi.org/10.4056/sigs.591104 |
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