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Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family ‘Haliangiaceae’. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms,...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035250/ https://www.ncbi.nlm.nih.gov/pubmed/21304682 http://dx.doi.org/10.4056/sigs.69.1277 |
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author | Ivanova, Natalia Daum, Chris Lang, Elke Abt, Birte Kopitz, Markus Saunders, Elizabeth Lapidus, Alla Lucas, Susan Glavina Del Rio, Tijana Nolan, Matt Tice, Hope Copeland, Alex Cheng, Jan-Fang Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Pati, Amrita Mikhailova, Natalia Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Rohde, Manfred Göker, Markus Bristow, Jim Markowitz, Victor Eisen, Jonathan A. Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter |
author_facet | Ivanova, Natalia Daum, Chris Lang, Elke Abt, Birte Kopitz, Markus Saunders, Elizabeth Lapidus, Alla Lucas, Susan Glavina Del Rio, Tijana Nolan, Matt Tice, Hope Copeland, Alex Cheng, Jan-Fang Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Pati, Amrita Mikhailova, Natalia Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Rohde, Manfred Göker, Markus Bristow, Jim Markowitz, Victor Eisen, Jonathan A. Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter |
author_sort | Ivanova, Natalia |
collection | PubMed |
description | Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family ‘Haliangiaceae’. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035250 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352502011-02-08 Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) Ivanova, Natalia Daum, Chris Lang, Elke Abt, Birte Kopitz, Markus Saunders, Elizabeth Lapidus, Alla Lucas, Susan Glavina Del Rio, Tijana Nolan, Matt Tice, Hope Copeland, Alex Cheng, Jan-Fang Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Pati, Amrita Mikhailova, Natalia Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Rohde, Manfred Göker, Markus Bristow, Jim Markowitz, Victor Eisen, Jonathan A. Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family ‘Haliangiaceae’. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035250/ /pubmed/21304682 http://dx.doi.org/10.4056/sigs.69.1277 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Ivanova, Natalia Daum, Chris Lang, Elke Abt, Birte Kopitz, Markus Saunders, Elizabeth Lapidus, Alla Lucas, Susan Glavina Del Rio, Tijana Nolan, Matt Tice, Hope Copeland, Alex Cheng, Jan-Fang Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Pati, Amrita Mikhailova, Natalia Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Rohde, Manfred Göker, Markus Bristow, Jim Markowitz, Victor Eisen, Jonathan A. Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) |
title | Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) |
title_full | Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) |
title_fullStr | Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) |
title_full_unstemmed | Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) |
title_short | Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) |
title_sort | complete genome sequence of haliangium ochraceum type strain (smp-2(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035250/ https://www.ncbi.nlm.nih.gov/pubmed/21304682 http://dx.doi.org/10.4056/sigs.69.1277 |
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