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Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))

Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family ‘Haliangiaceae’. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms,...

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Autores principales: Ivanova, Natalia, Daum, Chris, Lang, Elke, Abt, Birte, Kopitz, Markus, Saunders, Elizabeth, Lapidus, Alla, Lucas, Susan, Glavina Del Rio, Tijana, Nolan, Matt, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Chen, Feng, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Mavromatis, Konstantinos, Pati, Amrita, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brettin, Thomas, Rohde, Manfred, Göker, Markus, Bristow, Jim, Markowitz, Victor, Eisen, Jonathan A., Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035250/
https://www.ncbi.nlm.nih.gov/pubmed/21304682
http://dx.doi.org/10.4056/sigs.69.1277
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author Ivanova, Natalia
Daum, Chris
Lang, Elke
Abt, Birte
Kopitz, Markus
Saunders, Elizabeth
Lapidus, Alla
Lucas, Susan
Glavina Del Rio, Tijana
Nolan, Matt
Tice, Hope
Copeland, Alex
Cheng, Jan-Fang
Chen, Feng
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Mavromatis, Konstantinos
Pati, Amrita
Mikhailova, Natalia
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Rohde, Manfred
Göker, Markus
Bristow, Jim
Markowitz, Victor
Eisen, Jonathan A.
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Ivanova, Natalia
Daum, Chris
Lang, Elke
Abt, Birte
Kopitz, Markus
Saunders, Elizabeth
Lapidus, Alla
Lucas, Susan
Glavina Del Rio, Tijana
Nolan, Matt
Tice, Hope
Copeland, Alex
Cheng, Jan-Fang
Chen, Feng
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Mavromatis, Konstantinos
Pati, Amrita
Mikhailova, Natalia
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Rohde, Manfred
Göker, Markus
Bristow, Jim
Markowitz, Victor
Eisen, Jonathan A.
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Ivanova, Natalia
collection PubMed
description Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family ‘Haliangiaceae’. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352502011-02-08 Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T)) Ivanova, Natalia Daum, Chris Lang, Elke Abt, Birte Kopitz, Markus Saunders, Elizabeth Lapidus, Alla Lucas, Susan Glavina Del Rio, Tijana Nolan, Matt Tice, Hope Copeland, Alex Cheng, Jan-Fang Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Mavromatis, Konstantinos Pati, Amrita Mikhailova, Natalia Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Rohde, Manfred Göker, Markus Bristow, Jim Markowitz, Victor Eisen, Jonathan A. Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family ‘Haliangiaceae’. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035250/ /pubmed/21304682 http://dx.doi.org/10.4056/sigs.69.1277 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Ivanova, Natalia
Daum, Chris
Lang, Elke
Abt, Birte
Kopitz, Markus
Saunders, Elizabeth
Lapidus, Alla
Lucas, Susan
Glavina Del Rio, Tijana
Nolan, Matt
Tice, Hope
Copeland, Alex
Cheng, Jan-Fang
Chen, Feng
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Mavromatis, Konstantinos
Pati, Amrita
Mikhailova, Natalia
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Rohde, Manfred
Göker, Markus
Bristow, Jim
Markowitz, Victor
Eisen, Jonathan A.
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
title Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
title_full Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
title_fullStr Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
title_full_unstemmed Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
title_short Complete genome sequence of Haliangium ochraceum type strain (SMP-2(T))
title_sort complete genome sequence of haliangium ochraceum type strain (smp-2(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035250/
https://www.ncbi.nlm.nih.gov/pubmed/21304682
http://dx.doi.org/10.4056/sigs.69.1277
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