Cargando…

Complete genome sequence of Veillonella parvula type strain (Te3(T))

Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opport...

Descripción completa

Detalles Bibliográficos
Autores principales: Gronow, Sabine, Welnitz, Sabine, Lapidus, Alla, Nolan, Matt, Ivanova, Natalia, Glavina Del Rio, Tijana, Copeland, Alex, Chen, Feng, Tice, Hope, Pitluck, Sam, Cheng, Jan-Fang, Saunders, Elizabeth, Brettin, Thomas, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Pati, Amrita, Mavromatis, Konstantinos, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Chain, Patrick, Rohde, Manfred, Göker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Lucas, Susan
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035260/
https://www.ncbi.nlm.nih.gov/pubmed/21304678
http://dx.doi.org/10.4056/sigs.521107
_version_ 1782197748716535808
author Gronow, Sabine
Welnitz, Sabine
Lapidus, Alla
Nolan, Matt
Ivanova, Natalia
Glavina Del Rio, Tijana
Copeland, Alex
Chen, Feng
Tice, Hope
Pitluck, Sam
Cheng, Jan-Fang
Saunders, Elizabeth
Brettin, Thomas
Han, Cliff
Detter, John C.
Bruce, David
Goodwin, Lynne
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Pati, Amrita
Mavromatis, Konstantinos
Mikhailova, Natalia
Chen, Amy
Palaniappan, Krishna
Chain, Patrick
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lucas, Susan
author_facet Gronow, Sabine
Welnitz, Sabine
Lapidus, Alla
Nolan, Matt
Ivanova, Natalia
Glavina Del Rio, Tijana
Copeland, Alex
Chen, Feng
Tice, Hope
Pitluck, Sam
Cheng, Jan-Fang
Saunders, Elizabeth
Brettin, Thomas
Han, Cliff
Detter, John C.
Bruce, David
Goodwin, Lynne
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Pati, Amrita
Mavromatis, Konstantinos
Mikhailova, Natalia
Chen, Amy
Palaniappan, Krishna
Chain, Patrick
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lucas, Susan
author_sort Gronow, Sabine
collection PubMed
description Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opportunistic infections. The species is strictly anaerobic and grows as small cocci which usually occur in pairs. Veillonellae are characterized by their unusual metabolism which is centered on the activity of the enzyme methylmalonyl-CoA decarboxylase. Strain Te3(T), the type strain of the species, was isolated from the human intestinal tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large clostridial family Veillonellaceae, and the 2,132,142 bp long single replicon genome with its 1,859 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
format Text
id pubmed-3035260
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Michigan State University
record_format MEDLINE/PubMed
spelling pubmed-30352602011-02-08 Complete genome sequence of Veillonella parvula type strain (Te3(T)) Gronow, Sabine Welnitz, Sabine Lapidus, Alla Nolan, Matt Ivanova, Natalia Glavina Del Rio, Tijana Copeland, Alex Chen, Feng Tice, Hope Pitluck, Sam Cheng, Jan-Fang Saunders, Elizabeth Brettin, Thomas Han, Cliff Detter, John C. Bruce, David Goodwin, Lynne Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Pati, Amrita Mavromatis, Konstantinos Mikhailova, Natalia Chen, Amy Palaniappan, Krishna Chain, Patrick Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lucas, Susan Stand Genomic Sci Short Genome Reports Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opportunistic infections. The species is strictly anaerobic and grows as small cocci which usually occur in pairs. Veillonellae are characterized by their unusual metabolism which is centered on the activity of the enzyme methylmalonyl-CoA decarboxylase. Strain Te3(T), the type strain of the species, was isolated from the human intestinal tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large clostridial family Veillonellaceae, and the 2,132,142 bp long single replicon genome with its 1,859 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035260/ /pubmed/21304678 http://dx.doi.org/10.4056/sigs.521107 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Gronow, Sabine
Welnitz, Sabine
Lapidus, Alla
Nolan, Matt
Ivanova, Natalia
Glavina Del Rio, Tijana
Copeland, Alex
Chen, Feng
Tice, Hope
Pitluck, Sam
Cheng, Jan-Fang
Saunders, Elizabeth
Brettin, Thomas
Han, Cliff
Detter, John C.
Bruce, David
Goodwin, Lynne
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Pati, Amrita
Mavromatis, Konstantinos
Mikhailova, Natalia
Chen, Amy
Palaniappan, Krishna
Chain, Patrick
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lucas, Susan
Complete genome sequence of Veillonella parvula type strain (Te3(T))
title Complete genome sequence of Veillonella parvula type strain (Te3(T))
title_full Complete genome sequence of Veillonella parvula type strain (Te3(T))
title_fullStr Complete genome sequence of Veillonella parvula type strain (Te3(T))
title_full_unstemmed Complete genome sequence of Veillonella parvula type strain (Te3(T))
title_short Complete genome sequence of Veillonella parvula type strain (Te3(T))
title_sort complete genome sequence of veillonella parvula type strain (te3(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035260/
https://www.ncbi.nlm.nih.gov/pubmed/21304678
http://dx.doi.org/10.4056/sigs.521107
work_keys_str_mv AT gronowsabine completegenomesequenceofveillonellaparvulatypestrainte3t
AT welnitzsabine completegenomesequenceofveillonellaparvulatypestrainte3t
AT lapidusalla completegenomesequenceofveillonellaparvulatypestrainte3t
AT nolanmatt completegenomesequenceofveillonellaparvulatypestrainte3t
AT ivanovanatalia completegenomesequenceofveillonellaparvulatypestrainte3t
AT glavinadelriotijana completegenomesequenceofveillonellaparvulatypestrainte3t
AT copelandalex completegenomesequenceofveillonellaparvulatypestrainte3t
AT chenfeng completegenomesequenceofveillonellaparvulatypestrainte3t
AT ticehope completegenomesequenceofveillonellaparvulatypestrainte3t
AT pitlucksam completegenomesequenceofveillonellaparvulatypestrainte3t
AT chengjanfang completegenomesequenceofveillonellaparvulatypestrainte3t
AT saunderselizabeth completegenomesequenceofveillonellaparvulatypestrainte3t
AT brettinthomas completegenomesequenceofveillonellaparvulatypestrainte3t
AT hancliff completegenomesequenceofveillonellaparvulatypestrainte3t
AT detterjohnc completegenomesequenceofveillonellaparvulatypestrainte3t
AT brucedavid completegenomesequenceofveillonellaparvulatypestrainte3t
AT goodwinlynne completegenomesequenceofveillonellaparvulatypestrainte3t
AT landmiriam completegenomesequenceofveillonellaparvulatypestrainte3t
AT hauserloren completegenomesequenceofveillonellaparvulatypestrainte3t
AT changyunjuan completegenomesequenceofveillonellaparvulatypestrainte3t
AT jeffriescynthiad completegenomesequenceofveillonellaparvulatypestrainte3t
AT patiamrita completegenomesequenceofveillonellaparvulatypestrainte3t
AT mavromatiskonstantinos completegenomesequenceofveillonellaparvulatypestrainte3t
AT mikhailovanatalia completegenomesequenceofveillonellaparvulatypestrainte3t
AT chenamy completegenomesequenceofveillonellaparvulatypestrainte3t
AT palaniappankrishna completegenomesequenceofveillonellaparvulatypestrainte3t
AT chainpatrick completegenomesequenceofveillonellaparvulatypestrainte3t
AT rohdemanfred completegenomesequenceofveillonellaparvulatypestrainte3t
AT gokermarkus completegenomesequenceofveillonellaparvulatypestrainte3t
AT bristowjim completegenomesequenceofveillonellaparvulatypestrainte3t
AT eisenjonathana completegenomesequenceofveillonellaparvulatypestrainte3t
AT markowitzvictor completegenomesequenceofveillonellaparvulatypestrainte3t
AT hugenholtzphilip completegenomesequenceofveillonellaparvulatypestrainte3t
AT kyrpidesnikosc completegenomesequenceofveillonellaparvulatypestrainte3t
AT klenkhanspeter completegenomesequenceofveillonellaparvulatypestrainte3t
AT lucassusan completegenomesequenceofveillonellaparvulatypestrainte3t