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Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))

Sphaerobacter thermophilus Demharter et al. 1989 is the sole and type species of the genus Sphaerobacter, which is the type genus of the family Sphaerobacteraceae, the order Sphaerobacterales and the subclass Sphaerobacteridae. Phylogenetically, it belongs to the genomically little studied class of...

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Autores principales: Pati, Amrita, LaButti, Kurt, Pukall, Rüdiger, Nolan, Matt, Glavina Del Rio, Tijana, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Copeland, Alex, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pitluck, Sam, Bruce, David, Goodwin, Lynne, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chen, Amy, Palaniappan, Krishna, Chain, Patrick, Brettin, Thomas, Sikorski, Johannes, Rohde, Manfred, Göker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Lapidus, Alla
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035262/
https://www.ncbi.nlm.nih.gov/pubmed/21304677
http://dx.doi.org/10.4056/sigs.601105
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author Pati, Amrita
LaButti, Kurt
Pukall, Rüdiger
Nolan, Matt
Glavina Del Rio, Tijana
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Copeland, Alex
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pitluck, Sam
Bruce, David
Goodwin, Lynne
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chen, Amy
Palaniappan, Krishna
Chain, Patrick
Brettin, Thomas
Sikorski, Johannes
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
author_facet Pati, Amrita
LaButti, Kurt
Pukall, Rüdiger
Nolan, Matt
Glavina Del Rio, Tijana
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Copeland, Alex
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pitluck, Sam
Bruce, David
Goodwin, Lynne
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chen, Amy
Palaniappan, Krishna
Chain, Patrick
Brettin, Thomas
Sikorski, Johannes
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
author_sort Pati, Amrita
collection PubMed
description Sphaerobacter thermophilus Demharter et al. 1989 is the sole and type species of the genus Sphaerobacter, which is the type genus of the family Sphaerobacteraceae, the order Sphaerobacterales and the subclass Sphaerobacteridae. Phylogenetically, it belongs to the genomically little studied class of the Thermomicrobia in the bacterial phylum Chloroflexi. Here, the genome of strain S 6022(T) is described which is an obligate aerobe that was originally isolated from an aerated laboratory-scale fermentor that was pulse fed with municipal sewage sludge. We describe the features of this organism, together with the complete genome and annotation. This is the first complete genome sequence of the thermomicrobial subclass Sphaerobacteridae, and the second sequence from the chloroflexal class Thermomicrobia. The 3,993,764 bp genome with its 3,525 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352622011-02-08 Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) Pati, Amrita LaButti, Kurt Pukall, Rüdiger Nolan, Matt Glavina Del Rio, Tijana Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Copeland, Alex Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pitluck, Sam Bruce, David Goodwin, Lynne Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chen, Amy Palaniappan, Krishna Chain, Patrick Brettin, Thomas Sikorski, Johannes Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Sphaerobacter thermophilus Demharter et al. 1989 is the sole and type species of the genus Sphaerobacter, which is the type genus of the family Sphaerobacteraceae, the order Sphaerobacterales and the subclass Sphaerobacteridae. Phylogenetically, it belongs to the genomically little studied class of the Thermomicrobia in the bacterial phylum Chloroflexi. Here, the genome of strain S 6022(T) is described which is an obligate aerobe that was originally isolated from an aerated laboratory-scale fermentor that was pulse fed with municipal sewage sludge. We describe the features of this organism, together with the complete genome and annotation. This is the first complete genome sequence of the thermomicrobial subclass Sphaerobacteridae, and the second sequence from the chloroflexal class Thermomicrobia. The 3,993,764 bp genome with its 3,525 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035262/ /pubmed/21304677 http://dx.doi.org/10.4056/sigs.601105 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Pati, Amrita
LaButti, Kurt
Pukall, Rüdiger
Nolan, Matt
Glavina Del Rio, Tijana
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Copeland, Alex
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pitluck, Sam
Bruce, David
Goodwin, Lynne
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chen, Amy
Palaniappan, Krishna
Chain, Patrick
Brettin, Thomas
Sikorski, Johannes
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
title Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
title_full Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
title_fullStr Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
title_full_unstemmed Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
title_short Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
title_sort complete genome sequence of sphaerobacter thermophilus type strain (s 6022(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035262/
https://www.ncbi.nlm.nih.gov/pubmed/21304677
http://dx.doi.org/10.4056/sigs.601105
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