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Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T))
Sphaerobacter thermophilus Demharter et al. 1989 is the sole and type species of the genus Sphaerobacter, which is the type genus of the family Sphaerobacteraceae, the order Sphaerobacterales and the subclass Sphaerobacteridae. Phylogenetically, it belongs to the genomically little studied class of...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035262/ https://www.ncbi.nlm.nih.gov/pubmed/21304677 http://dx.doi.org/10.4056/sigs.601105 |
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author | Pati, Amrita LaButti, Kurt Pukall, Rüdiger Nolan, Matt Glavina Del Rio, Tijana Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Copeland, Alex Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pitluck, Sam Bruce, David Goodwin, Lynne Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chen, Amy Palaniappan, Krishna Chain, Patrick Brettin, Thomas Sikorski, Johannes Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_facet | Pati, Amrita LaButti, Kurt Pukall, Rüdiger Nolan, Matt Glavina Del Rio, Tijana Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Copeland, Alex Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pitluck, Sam Bruce, David Goodwin, Lynne Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chen, Amy Palaniappan, Krishna Chain, Patrick Brettin, Thomas Sikorski, Johannes Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_sort | Pati, Amrita |
collection | PubMed |
description | Sphaerobacter thermophilus Demharter et al. 1989 is the sole and type species of the genus Sphaerobacter, which is the type genus of the family Sphaerobacteraceae, the order Sphaerobacterales and the subclass Sphaerobacteridae. Phylogenetically, it belongs to the genomically little studied class of the Thermomicrobia in the bacterial phylum Chloroflexi. Here, the genome of strain S 6022(T) is described which is an obligate aerobe that was originally isolated from an aerated laboratory-scale fermentor that was pulse fed with municipal sewage sludge. We describe the features of this organism, together with the complete genome and annotation. This is the first complete genome sequence of the thermomicrobial subclass Sphaerobacteridae, and the second sequence from the chloroflexal class Thermomicrobia. The 3,993,764 bp genome with its 3,525 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035262 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352622011-02-08 Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) Pati, Amrita LaButti, Kurt Pukall, Rüdiger Nolan, Matt Glavina Del Rio, Tijana Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Copeland, Alex Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pitluck, Sam Bruce, David Goodwin, Lynne Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chen, Amy Palaniappan, Krishna Chain, Patrick Brettin, Thomas Sikorski, Johannes Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Sphaerobacter thermophilus Demharter et al. 1989 is the sole and type species of the genus Sphaerobacter, which is the type genus of the family Sphaerobacteraceae, the order Sphaerobacterales and the subclass Sphaerobacteridae. Phylogenetically, it belongs to the genomically little studied class of the Thermomicrobia in the bacterial phylum Chloroflexi. Here, the genome of strain S 6022(T) is described which is an obligate aerobe that was originally isolated from an aerated laboratory-scale fermentor that was pulse fed with municipal sewage sludge. We describe the features of this organism, together with the complete genome and annotation. This is the first complete genome sequence of the thermomicrobial subclass Sphaerobacteridae, and the second sequence from the chloroflexal class Thermomicrobia. The 3,993,764 bp genome with its 3,525 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-01-28 /pmc/articles/PMC3035262/ /pubmed/21304677 http://dx.doi.org/10.4056/sigs.601105 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Pati, Amrita LaButti, Kurt Pukall, Rüdiger Nolan, Matt Glavina Del Rio, Tijana Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Copeland, Alex Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pitluck, Sam Bruce, David Goodwin, Lynne Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chen, Amy Palaniappan, Krishna Chain, Patrick Brettin, Thomas Sikorski, Johannes Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) |
title | Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) |
title_full | Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) |
title_fullStr | Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) |
title_full_unstemmed | Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) |
title_short | Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022(T)) |
title_sort | complete genome sequence of sphaerobacter thermophilus type strain (s 6022(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035262/ https://www.ncbi.nlm.nih.gov/pubmed/21304677 http://dx.doi.org/10.4056/sigs.601105 |
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