Cargando…

Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))

Nakamurella multipartita (Yoshimi et al. 1996) Tao et al. 2004 is the type species of the monospecific genus Nakamurella in the actinobacterial suborder Frankineae. The nonmotile, coccus-shaped strain was isolated from activated sludge acclimated with sugar-containing synthetic wastewater, and is ca...

Descripción completa

Detalles Bibliográficos
Autores principales: Tice, Hope, Mayilraj, Shanmugam, Sims, David, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Glavina Del Rio, Tijana, Copeland, Alex, Cheng, Jan-Fang, Meincke, Linda, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brettin, Thomas, Rohde, Manfred, Göker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Chen, Feng
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035273/
https://www.ncbi.nlm.nih.gov/pubmed/21304699
http://dx.doi.org/10.4056/sigs.721316
_version_ 1782197751823466496
author Tice, Hope
Mayilraj, Shanmugam
Sims, David
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Glavina Del Rio, Tijana
Copeland, Alex
Cheng, Jan-Fang
Meincke, Linda
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Chen, Feng
author_facet Tice, Hope
Mayilraj, Shanmugam
Sims, David
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Glavina Del Rio, Tijana
Copeland, Alex
Cheng, Jan-Fang
Meincke, Linda
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Chen, Feng
author_sort Tice, Hope
collection PubMed
description Nakamurella multipartita (Yoshimi et al. 1996) Tao et al. 2004 is the type species of the monospecific genus Nakamurella in the actinobacterial suborder Frankineae. The nonmotile, coccus-shaped strain was isolated from activated sludge acclimated with sugar-containing synthetic wastewater, and is capable of accumulating large amounts of polysaccharides in its cells. Here we describe the features of the organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Nakamurellaceae. The 6,060,298 bp long single replicon genome with its 5415 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
format Text
id pubmed-3035273
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Michigan State University
record_format MEDLINE/PubMed
spelling pubmed-30352732011-02-08 Complete genome sequence of Nakamurella multipartita type strain (Y-104(T)) Tice, Hope Mayilraj, Shanmugam Sims, David Lapidus, Alla Nolan, Matt Lucas, Susan Glavina Del Rio, Tijana Copeland, Alex Cheng, Jan-Fang Meincke, Linda Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Rohde, Manfred Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Chen, Feng Stand Genomic Sci Short Genome Reports Nakamurella multipartita (Yoshimi et al. 1996) Tao et al. 2004 is the type species of the monospecific genus Nakamurella in the actinobacterial suborder Frankineae. The nonmotile, coccus-shaped strain was isolated from activated sludge acclimated with sugar-containing synthetic wastewater, and is capable of accumulating large amounts of polysaccharides in its cells. Here we describe the features of the organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Nakamurellaceae. The 6,060,298 bp long single replicon genome with its 5415 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-03-30 /pmc/articles/PMC3035273/ /pubmed/21304699 http://dx.doi.org/10.4056/sigs.721316 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Tice, Hope
Mayilraj, Shanmugam
Sims, David
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Glavina Del Rio, Tijana
Copeland, Alex
Cheng, Jan-Fang
Meincke, Linda
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Rohde, Manfred
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Chen, Feng
Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))
title Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))
title_full Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))
title_fullStr Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))
title_full_unstemmed Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))
title_short Complete genome sequence of Nakamurella multipartita type strain (Y-104(T))
title_sort complete genome sequence of nakamurella multipartita type strain (y-104(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035273/
https://www.ncbi.nlm.nih.gov/pubmed/21304699
http://dx.doi.org/10.4056/sigs.721316
work_keys_str_mv AT ticehope completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT mayilrajshanmugam completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT simsdavid completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT lapidusalla completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT nolanmatt completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT lucassusan completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT glavinadelriotijana completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT copelandalex completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT chengjanfang completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT meinckelinda completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT brucedavid completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT goodwinlynne completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT pitlucksam completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT ivanovanatalia completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT mavromatiskonstantinos completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT ovchinnikovagalina completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT patiamrita completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT chenamy completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT palaniappankrishna completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT landmiriam completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT hauserloren completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT changyunjuan completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT jeffriescynthiad completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT detterjohnc completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT brettinthomas completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT rohdemanfred completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT gokermarkus completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT bristowjim completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT eisenjonathana completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT markowitzvictor completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT hugenholtzphilip completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT kyrpidesnikosc completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT klenkhanspeter completegenomesequenceofnakamurellamultipartitatypestrainy104t
AT chenfeng completegenomesequenceofnakamurellamultipartitatypestrainy104t