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Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))

Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis...

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Autores principales: Mavromatis, Konstantinos, Abt, Birte, Brambilla, Evelyne, Lapidus, Alla, Copeland, Alex, Deshpande, Shweta, Nolan, Matt, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Detter, John C., Woyke, Tanja, Goodwin, Lynne, Pitluck, Sam, Held, Brittany, Brettin, Thomas, Tapia, Roxanne, Ivanova, Natalia, Mikhailova, Natalia, Pati, Amrita, Liolios, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Rohde, Manfred, Göker, Markus, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Klenk, Hans-Peter, Kyrpides, Nikos C.
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035286/
https://www.ncbi.nlm.nih.gov/pubmed/21304713
http://dx.doi.org/10.4056/sigs.952166
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author Mavromatis, Konstantinos
Abt, Birte
Brambilla, Evelyne
Lapidus, Alla
Copeland, Alex
Deshpande, Shweta
Nolan, Matt
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Detter, John C.
Woyke, Tanja
Goodwin, Lynne
Pitluck, Sam
Held, Brittany
Brettin, Thomas
Tapia, Roxanne
Ivanova, Natalia
Mikhailova, Natalia
Pati, Amrita
Liolios, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Rohde, Manfred
Göker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Klenk, Hans-Peter
Kyrpides, Nikos C.
author_facet Mavromatis, Konstantinos
Abt, Birte
Brambilla, Evelyne
Lapidus, Alla
Copeland, Alex
Deshpande, Shweta
Nolan, Matt
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Detter, John C.
Woyke, Tanja
Goodwin, Lynne
Pitluck, Sam
Held, Brittany
Brettin, Thomas
Tapia, Roxanne
Ivanova, Natalia
Mikhailova, Natalia
Pati, Amrita
Liolios, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Rohde, Manfred
Göker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Klenk, Hans-Peter
Kyrpides, Nikos C.
author_sort Mavromatis, Konstantinos
collection PubMed
description Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis is of special interest because of its phylogenetic position in a genomically under-studied area of the bacterial diversity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Puniceicoccaceae. The 3,750,771 bp long genome with its 3,137 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352862011-02-08 Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) Mavromatis, Konstantinos Abt, Birte Brambilla, Evelyne Lapidus, Alla Copeland, Alex Deshpande, Shweta Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Detter, John C. Woyke, Tanja Goodwin, Lynne Pitluck, Sam Held, Brittany Brettin, Thomas Tapia, Roxanne Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Liolios, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis is of special interest because of its phylogenetic position in a genomically under-studied area of the bacterial diversity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Puniceicoccaceae. The 3,750,771 bp long genome with its 3,137 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-06-15 /pmc/articles/PMC3035286/ /pubmed/21304713 http://dx.doi.org/10.4056/sigs.952166 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Mavromatis, Konstantinos
Abt, Birte
Brambilla, Evelyne
Lapidus, Alla
Copeland, Alex
Deshpande, Shweta
Nolan, Matt
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Detter, John C.
Woyke, Tanja
Goodwin, Lynne
Pitluck, Sam
Held, Brittany
Brettin, Thomas
Tapia, Roxanne
Ivanova, Natalia
Mikhailova, Natalia
Pati, Amrita
Liolios, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Rohde, Manfred
Göker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Klenk, Hans-Peter
Kyrpides, Nikos C.
Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
title Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
title_full Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
title_fullStr Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
title_full_unstemmed Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
title_short Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
title_sort complete genome sequence of coraliomargarita akajimensis type strain (04oka010-24(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035286/
https://www.ncbi.nlm.nih.gov/pubmed/21304713
http://dx.doi.org/10.4056/sigs.952166
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