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Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T))
Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035286/ https://www.ncbi.nlm.nih.gov/pubmed/21304713 http://dx.doi.org/10.4056/sigs.952166 |
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author | Mavromatis, Konstantinos Abt, Birte Brambilla, Evelyne Lapidus, Alla Copeland, Alex Deshpande, Shweta Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Detter, John C. Woyke, Tanja Goodwin, Lynne Pitluck, Sam Held, Brittany Brettin, Thomas Tapia, Roxanne Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Liolios, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
author_facet | Mavromatis, Konstantinos Abt, Birte Brambilla, Evelyne Lapidus, Alla Copeland, Alex Deshpande, Shweta Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Detter, John C. Woyke, Tanja Goodwin, Lynne Pitluck, Sam Held, Brittany Brettin, Thomas Tapia, Roxanne Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Liolios, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
author_sort | Mavromatis, Konstantinos |
collection | PubMed |
description | Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis is of special interest because of its phylogenetic position in a genomically under-studied area of the bacterial diversity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Puniceicoccaceae. The 3,750,771 bp long genome with its 3,137 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035286 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352862011-02-08 Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) Mavromatis, Konstantinos Abt, Birte Brambilla, Evelyne Lapidus, Alla Copeland, Alex Deshpande, Shweta Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Detter, John C. Woyke, Tanja Goodwin, Lynne Pitluck, Sam Held, Brittany Brettin, Thomas Tapia, Roxanne Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Liolios, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis is of special interest because of its phylogenetic position in a genomically under-studied area of the bacterial diversity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Puniceicoccaceae. The 3,750,771 bp long genome with its 3,137 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-06-15 /pmc/articles/PMC3035286/ /pubmed/21304713 http://dx.doi.org/10.4056/sigs.952166 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Mavromatis, Konstantinos Abt, Birte Brambilla, Evelyne Lapidus, Alla Copeland, Alex Deshpande, Shweta Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Detter, John C. Woyke, Tanja Goodwin, Lynne Pitluck, Sam Held, Brittany Brettin, Thomas Tapia, Roxanne Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Liolios, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) |
title | Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) |
title_full | Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) |
title_fullStr | Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) |
title_full_unstemmed | Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) |
title_short | Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24(T)) |
title_sort | complete genome sequence of coraliomargarita akajimensis type strain (04oka010-24(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035286/ https://www.ncbi.nlm.nih.gov/pubmed/21304713 http://dx.doi.org/10.4056/sigs.952166 |
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