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Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T))
Arcobacter nitrofigilis (McClung et al. 1983) Vandamme et al. 1991 is the type species of the genus Arcobacter in the family Campylobacteraceae within the Epsilonproteobacteria. The species was first described in 1983 as Campylobacter nitrofigilis [1] after its detection as a free-living, nitrogen-f...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035288/ https://www.ncbi.nlm.nih.gov/pubmed/21304714 http://dx.doi.org/10.4056/sigs.912121 |
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author | Pati, Amrita Gronow, Sabine Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Chertkov, Olga Bruce, David Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
author_facet | Pati, Amrita Gronow, Sabine Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Chertkov, Olga Bruce, David Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
author_sort | Pati, Amrita |
collection | PubMed |
description | Arcobacter nitrofigilis (McClung et al. 1983) Vandamme et al. 1991 is the type species of the genus Arcobacter in the family Campylobacteraceae within the Epsilonproteobacteria. The species was first described in 1983 as Campylobacter nitrofigilis [1] after its detection as a free-living, nitrogen-fixing Campylobacter species associated with Spartina alterniflora Loisel roots [2]. It is of phylogenetic interest because of its lifestyle as a symbiotic organism in a marine environment in contrast to many other Arcobacter species which are associated with warm-blooded animals and tend to be pathogenic. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a type stain of the genus Arcobacter. The 3,192,235 bp genome with its 3,154 protein-coding and 70 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035288 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352882011-02-08 Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) Pati, Amrita Gronow, Sabine Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Chertkov, Olga Bruce, David Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Arcobacter nitrofigilis (McClung et al. 1983) Vandamme et al. 1991 is the type species of the genus Arcobacter in the family Campylobacteraceae within the Epsilonproteobacteria. The species was first described in 1983 as Campylobacter nitrofigilis [1] after its detection as a free-living, nitrogen-fixing Campylobacter species associated with Spartina alterniflora Loisel roots [2]. It is of phylogenetic interest because of its lifestyle as a symbiotic organism in a marine environment in contrast to many other Arcobacter species which are associated with warm-blooded animals and tend to be pathogenic. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a type stain of the genus Arcobacter. The 3,192,235 bp genome with its 3,154 protein-coding and 70 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-06-15 /pmc/articles/PMC3035288/ /pubmed/21304714 http://dx.doi.org/10.4056/sigs.912121 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Pati, Amrita Gronow, Sabine Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Nolan, Matt Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Chertkov, Olga Bruce, David Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) |
title | Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) |
title_full | Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) |
title_fullStr | Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) |
title_full_unstemmed | Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) |
title_short | Complete genome sequence of Arcobacter nitrofigilis type strain (CI(T)) |
title_sort | complete genome sequence of arcobacter nitrofigilis type strain (ci(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035288/ https://www.ncbi.nlm.nih.gov/pubmed/21304714 http://dx.doi.org/10.4056/sigs.912121 |
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