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Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))

Denitrovibrio acetiphilus Myhr and Torsvik 2000 is the type species of the genus Denitrovibrio in the bacterial family Deferribacteraceae. It is of phylogenetic interest because there are only six genera described in the family Deferribacteraceae. D. acetiphilus was isolated as a representative of a...

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Autores principales: Kiss, Hajnalka, Lang, Elke, Lapidus, Alla, Copeland, Alex, Nolan, Matt, Glavina Del Rio, Tijana, Chen, Feng, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Brettin, Thomas, Spring, Stefan, Rohde, Manfred, Göker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035293/
https://www.ncbi.nlm.nih.gov/pubmed/21304711
http://dx.doi.org/10.4056/sigs.892105
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author Kiss, Hajnalka
Lang, Elke
Lapidus, Alla
Copeland, Alex
Nolan, Matt
Glavina Del Rio, Tijana
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Spring, Stefan
Rohde, Manfred
Göker, Markus
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Kiss, Hajnalka
Lang, Elke
Lapidus, Alla
Copeland, Alex
Nolan, Matt
Glavina Del Rio, Tijana
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Spring, Stefan
Rohde, Manfred
Göker, Markus
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Kiss, Hajnalka
collection PubMed
description Denitrovibrio acetiphilus Myhr and Torsvik 2000 is the type species of the genus Denitrovibrio in the bacterial family Deferribacteraceae. It is of phylogenetic interest because there are only six genera described in the family Deferribacteraceae. D. acetiphilus was isolated as a representative of a population reducing nitrate to ammonia in a laboratory column simulating the conditions in off-shore oil recovery fields. When nitrate was added to this column undesirable hydrogen sulfide production was stopped because the sulfate reducing populations were superseded by these nitrate reducing bacteria. Here we describe the features of this marine, mesophilic, obligately anaerobic organism respiring by nitrate reduction, together with the complete genome sequence, and annotation. This is the second complete genome sequence of the order Deferribacterales and the class Deferribacteres, which is the sole class in the phylum Deferribacteres. The 3,222,077 bp genome with its 3,034 protein-coding and 51 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352932011-02-08 Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T)) Kiss, Hajnalka Lang, Elke Lapidus, Alla Copeland, Alex Nolan, Matt Glavina Del Rio, Tijana Chen, Feng Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Brettin, Thomas Spring, Stefan Rohde, Manfred Göker, Markus Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Denitrovibrio acetiphilus Myhr and Torsvik 2000 is the type species of the genus Denitrovibrio in the bacterial family Deferribacteraceae. It is of phylogenetic interest because there are only six genera described in the family Deferribacteraceae. D. acetiphilus was isolated as a representative of a population reducing nitrate to ammonia in a laboratory column simulating the conditions in off-shore oil recovery fields. When nitrate was added to this column undesirable hydrogen sulfide production was stopped because the sulfate reducing populations were superseded by these nitrate reducing bacteria. Here we describe the features of this marine, mesophilic, obligately anaerobic organism respiring by nitrate reduction, together with the complete genome sequence, and annotation. This is the second complete genome sequence of the order Deferribacterales and the class Deferribacteres, which is the sole class in the phylum Deferribacteres. The 3,222,077 bp genome with its 3,034 protein-coding and 51 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-06-15 /pmc/articles/PMC3035293/ /pubmed/21304711 http://dx.doi.org/10.4056/sigs.892105 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Kiss, Hajnalka
Lang, Elke
Lapidus, Alla
Copeland, Alex
Nolan, Matt
Glavina Del Rio, Tijana
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Brettin, Thomas
Spring, Stefan
Rohde, Manfred
Göker, Markus
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))
title Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))
title_full Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))
title_fullStr Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))
title_full_unstemmed Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))
title_short Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460(T))
title_sort complete genome sequence of denitrovibrio acetiphilus type strain (n2460(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035293/
https://www.ncbi.nlm.nih.gov/pubmed/21304711
http://dx.doi.org/10.4056/sigs.892105
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