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Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))

Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids o...

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Autores principales: Sun, Hui, Spring, Stefan, Lapidus, Alla, Davenport, Karen, Del Rio, Tijana Glavina, Tice, Hope, Nolan, Matt, Copeland, Alex, Cheng, Jan-Fang, Lucas, Susan, Tapia, Roxanne, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Pagani, Ionna, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Detter, John C., Han, Cliff, Rohde, Manfred, Brambilla, Evelyne, Göker, Markus, Woyke, Tanja, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Land, Miriam
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035298/
https://www.ncbi.nlm.nih.gov/pubmed/21304732
http://dx.doi.org/10.4056/sigs.1243258
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author Sun, Hui
Spring, Stefan
Lapidus, Alla
Davenport, Karen
Del Rio, Tijana Glavina
Tice, Hope
Nolan, Matt
Copeland, Alex
Cheng, Jan-Fang
Lucas, Susan
Tapia, Roxanne
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Pagani, Ionna
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Han, Cliff
Rohde, Manfred
Brambilla, Evelyne
Göker, Markus
Woyke, Tanja
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Land, Miriam
author_facet Sun, Hui
Spring, Stefan
Lapidus, Alla
Davenport, Karen
Del Rio, Tijana Glavina
Tice, Hope
Nolan, Matt
Copeland, Alex
Cheng, Jan-Fang
Lucas, Susan
Tapia, Roxanne
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Pagani, Ionna
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Han, Cliff
Rohde, Manfred
Brambilla, Evelyne
Göker, Markus
Woyke, Tanja
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Land, Miriam
author_sort Sun, Hui
collection PubMed
description Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids of up to 18 carbon atoms completely to CO(2). The acetyl-CoA/CODH (Wood-Ljungdahl) pathway is used by this species for the complete oxidation of carbon sources and autotrophic growth on formate. The type strain 2st14(T) was isolated from a ditch sediment collected near the University of Konstanz, Germany. This is the first completed genome sequence of a member of the order Desulfarculales. The 3,655,731 bp long single replicon genome with its 3,303 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352982011-02-08 Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) Sun, Hui Spring, Stefan Lapidus, Alla Davenport, Karen Del Rio, Tijana Glavina Tice, Hope Nolan, Matt Copeland, Alex Cheng, Jan-Fang Lucas, Susan Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Pagani, Ionna Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Han, Cliff Rohde, Manfred Brambilla, Evelyne Göker, Markus Woyke, Tanja Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Land, Miriam Stand Genomic Sci Short Genome Reports Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids of up to 18 carbon atoms completely to CO(2). The acetyl-CoA/CODH (Wood-Ljungdahl) pathway is used by this species for the complete oxidation of carbon sources and autotrophic growth on formate. The type strain 2st14(T) was isolated from a ditch sediment collected near the University of Konstanz, Germany. This is the first completed genome sequence of a member of the order Desulfarculales. The 3,655,731 bp long single replicon genome with its 3,303 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-11-20 /pmc/articles/PMC3035298/ /pubmed/21304732 http://dx.doi.org/10.4056/sigs.1243258 Text en
spellingShingle Short Genome Reports
Sun, Hui
Spring, Stefan
Lapidus, Alla
Davenport, Karen
Del Rio, Tijana Glavina
Tice, Hope
Nolan, Matt
Copeland, Alex
Cheng, Jan-Fang
Lucas, Susan
Tapia, Roxanne
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Pagani, Ionna
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Detter, John C.
Han, Cliff
Rohde, Manfred
Brambilla, Evelyne
Göker, Markus
Woyke, Tanja
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Land, Miriam
Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
title Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
title_full Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
title_fullStr Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
title_full_unstemmed Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
title_short Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
title_sort complete genome sequence of desulfarculus baarsii type strain (2st14(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035298/
https://www.ncbi.nlm.nih.gov/pubmed/21304732
http://dx.doi.org/10.4056/sigs.1243258
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