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Complete genome sequence of Desulfarculus baarsii type strain (2st14(T))
Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids o...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035298/ https://www.ncbi.nlm.nih.gov/pubmed/21304732 http://dx.doi.org/10.4056/sigs.1243258 |
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author | Sun, Hui Spring, Stefan Lapidus, Alla Davenport, Karen Del Rio, Tijana Glavina Tice, Hope Nolan, Matt Copeland, Alex Cheng, Jan-Fang Lucas, Susan Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Pagani, Ionna Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Han, Cliff Rohde, Manfred Brambilla, Evelyne Göker, Markus Woyke, Tanja Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Land, Miriam |
author_facet | Sun, Hui Spring, Stefan Lapidus, Alla Davenport, Karen Del Rio, Tijana Glavina Tice, Hope Nolan, Matt Copeland, Alex Cheng, Jan-Fang Lucas, Susan Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Pagani, Ionna Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Han, Cliff Rohde, Manfred Brambilla, Evelyne Göker, Markus Woyke, Tanja Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Land, Miriam |
author_sort | Sun, Hui |
collection | PubMed |
description | Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids of up to 18 carbon atoms completely to CO(2). The acetyl-CoA/CODH (Wood-Ljungdahl) pathway is used by this species for the complete oxidation of carbon sources and autotrophic growth on formate. The type strain 2st14(T) was isolated from a ditch sediment collected near the University of Konstanz, Germany. This is the first completed genome sequence of a member of the order Desulfarculales. The 3,655,731 bp long single replicon genome with its 3,303 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035298 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352982011-02-08 Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) Sun, Hui Spring, Stefan Lapidus, Alla Davenport, Karen Del Rio, Tijana Glavina Tice, Hope Nolan, Matt Copeland, Alex Cheng, Jan-Fang Lucas, Susan Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Pagani, Ionna Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Han, Cliff Rohde, Manfred Brambilla, Evelyne Göker, Markus Woyke, Tanja Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Land, Miriam Stand Genomic Sci Short Genome Reports Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids of up to 18 carbon atoms completely to CO(2). The acetyl-CoA/CODH (Wood-Ljungdahl) pathway is used by this species for the complete oxidation of carbon sources and autotrophic growth on formate. The type strain 2st14(T) was isolated from a ditch sediment collected near the University of Konstanz, Germany. This is the first completed genome sequence of a member of the order Desulfarculales. The 3,655,731 bp long single replicon genome with its 3,303 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-11-20 /pmc/articles/PMC3035298/ /pubmed/21304732 http://dx.doi.org/10.4056/sigs.1243258 Text en |
spellingShingle | Short Genome Reports Sun, Hui Spring, Stefan Lapidus, Alla Davenport, Karen Del Rio, Tijana Glavina Tice, Hope Nolan, Matt Copeland, Alex Cheng, Jan-Fang Lucas, Susan Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Pagani, Ionna Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Han, Cliff Rohde, Manfred Brambilla, Evelyne Göker, Markus Woyke, Tanja Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Land, Miriam Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) |
title | Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) |
title_full | Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) |
title_fullStr | Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) |
title_full_unstemmed | Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) |
title_short | Complete genome sequence of Desulfarculus baarsii type strain (2st14(T)) |
title_sort | complete genome sequence of desulfarculus baarsii type strain (2st14(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035298/ https://www.ncbi.nlm.nih.gov/pubmed/21304732 http://dx.doi.org/10.4056/sigs.1243258 |
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