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Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project

Between July 18(th) and 24(th) 2010, 26 leading microbial ecology, computation, bioinformatics and statistics researchers came together in Snowbird, Utah (USA) to discuss the challenge of how to best characterize the microbial world using next-generation sequencing technologies. The meeting was enti...

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Autores principales: Gilbert, Jack A., Meyer, Folker, Antonopoulos, Dion, Balaji, Pavan, Brown, C. Titus, Brown, Christopher T., Desai, Narayan, Eisen, Jonathan A, Evers, Dirk, Field, Dawn, Feng, Wu, Huson, Daniel, Jansson, Janet, Knight, Rob, Knight, James, Kolker, Eugene, Konstantindis, Kostas, Kostka, Joel, Kyrpides, Nikos, Mackelprang, Rachel, McHardy, Alice, Quince, Christopher, Raes, Jeroen, Sczyrba, Alexander, Shade, Ashley, Stevens, Rick
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035311/
https://www.ncbi.nlm.nih.gov/pubmed/21304727
http://dx.doi.org/10.4056/sigs.1433550
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author Gilbert, Jack A.
Meyer, Folker
Antonopoulos, Dion
Balaji, Pavan
Brown, C. Titus
Brown, Christopher T.
Desai, Narayan
Eisen, Jonathan A
Evers, Dirk
Field, Dawn
Feng, Wu
Huson, Daniel
Jansson, Janet
Knight, Rob
Knight, James
Kolker, Eugene
Konstantindis, Kostas
Kostka, Joel
Kyrpides, Nikos
Mackelprang, Rachel
McHardy, Alice
Quince, Christopher
Raes, Jeroen
Sczyrba, Alexander
Shade, Ashley
Stevens, Rick
author_facet Gilbert, Jack A.
Meyer, Folker
Antonopoulos, Dion
Balaji, Pavan
Brown, C. Titus
Brown, Christopher T.
Desai, Narayan
Eisen, Jonathan A
Evers, Dirk
Field, Dawn
Feng, Wu
Huson, Daniel
Jansson, Janet
Knight, Rob
Knight, James
Kolker, Eugene
Konstantindis, Kostas
Kostka, Joel
Kyrpides, Nikos
Mackelprang, Rachel
McHardy, Alice
Quince, Christopher
Raes, Jeroen
Sczyrba, Alexander
Shade, Ashley
Stevens, Rick
author_sort Gilbert, Jack A.
collection PubMed
description Between July 18(th) and 24(th) 2010, 26 leading microbial ecology, computation, bioinformatics and statistics researchers came together in Snowbird, Utah (USA) to discuss the challenge of how to best characterize the microbial world using next-generation sequencing technologies. The meeting was entitled “Terabase Metagenomics” and was sponsored by the Institute for Computing in Science (ICiS) summer 2010 workshop program. The aim of the workshop was to explore the fundamental questions relating to microbial ecology that could be addressed using advances in sequencing potential. Technological advances in next-generation sequencing platforms such as the Illumina HiSeq 2000 can generate in excess of 250 billion base pairs of genetic information in 8 days. Thus, the generation of a trillion base pairs of genetic information is becoming a routine matter. The main outcome from this meeting was the birth of a concept and practical approach to exploring microbial life on earth, the Earth Microbiome Project (EMP). Here we briefly describe the highlights of this meeting and provide an overview of the EMP concept and how it can be applied to exploration of the microbiome of each ecosystem on this planet.
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spelling pubmed-30353112011-02-08 Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project Gilbert, Jack A. Meyer, Folker Antonopoulos, Dion Balaji, Pavan Brown, C. Titus Brown, Christopher T. Desai, Narayan Eisen, Jonathan A Evers, Dirk Field, Dawn Feng, Wu Huson, Daniel Jansson, Janet Knight, Rob Knight, James Kolker, Eugene Konstantindis, Kostas Kostka, Joel Kyrpides, Nikos Mackelprang, Rachel McHardy, Alice Quince, Christopher Raes, Jeroen Sczyrba, Alexander Shade, Ashley Stevens, Rick Stand Genomic Sci Community Dialog Between July 18(th) and 24(th) 2010, 26 leading microbial ecology, computation, bioinformatics and statistics researchers came together in Snowbird, Utah (USA) to discuss the challenge of how to best characterize the microbial world using next-generation sequencing technologies. The meeting was entitled “Terabase Metagenomics” and was sponsored by the Institute for Computing in Science (ICiS) summer 2010 workshop program. The aim of the workshop was to explore the fundamental questions relating to microbial ecology that could be addressed using advances in sequencing potential. Technological advances in next-generation sequencing platforms such as the Illumina HiSeq 2000 can generate in excess of 250 billion base pairs of genetic information in 8 days. Thus, the generation of a trillion base pairs of genetic information is becoming a routine matter. The main outcome from this meeting was the birth of a concept and practical approach to exploring microbial life on earth, the Earth Microbiome Project (EMP). Here we briefly describe the highlights of this meeting and provide an overview of the EMP concept and how it can be applied to exploration of the microbiome of each ecosystem on this planet. Michigan State University 2010-12-25 /pmc/articles/PMC3035311/ /pubmed/21304727 http://dx.doi.org/10.4056/sigs.1433550 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Community Dialog
Gilbert, Jack A.
Meyer, Folker
Antonopoulos, Dion
Balaji, Pavan
Brown, C. Titus
Brown, Christopher T.
Desai, Narayan
Eisen, Jonathan A
Evers, Dirk
Field, Dawn
Feng, Wu
Huson, Daniel
Jansson, Janet
Knight, Rob
Knight, James
Kolker, Eugene
Konstantindis, Kostas
Kostka, Joel
Kyrpides, Nikos
Mackelprang, Rachel
McHardy, Alice
Quince, Christopher
Raes, Jeroen
Sczyrba, Alexander
Shade, Ashley
Stevens, Rick
Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project
title Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project
title_full Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project
title_fullStr Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project
title_full_unstemmed Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project
title_short Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project
title_sort meeting report: the terabase metagenomics workshop and the vision of an earth microbiome project
topic Community Dialog
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035311/
https://www.ncbi.nlm.nih.gov/pubmed/21304727
http://dx.doi.org/10.4056/sigs.1433550
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