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Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T))
‘Thermobaculum terrenum’ Botero et al. 2004 is the sole species within the proposed genus ‘Thermobaculum’. Strain YNP1(T) is the only cultivated member of an acid tolerant, extremely thermophilic species belonging to a phylogenetically isolated environmental clone group within the phylum Chloroflexi...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035366/ https://www.ncbi.nlm.nih.gov/pubmed/21304745 http://dx.doi.org/10.4056/sigs.1153107 |
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author | Kiss, Hajnalka Cleland, David Lapidus, Alla Lucas, Susan Del Rio, Tijana Glavina Nolan, Matt Tice, Hope Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Lu, Megan Brettin, Thomas Detter, John C. Göker, Markus Tindall, Brian J. Beck, Brian McDermott, Timothy R. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Cheng, Jan-Fang |
author_facet | Kiss, Hajnalka Cleland, David Lapidus, Alla Lucas, Susan Del Rio, Tijana Glavina Nolan, Matt Tice, Hope Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Lu, Megan Brettin, Thomas Detter, John C. Göker, Markus Tindall, Brian J. Beck, Brian McDermott, Timothy R. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Cheng, Jan-Fang |
author_sort | Kiss, Hajnalka |
collection | PubMed |
description | ‘Thermobaculum terrenum’ Botero et al. 2004 is the sole species within the proposed genus ‘Thermobaculum’. Strain YNP1(T) is the only cultivated member of an acid tolerant, extremely thermophilic species belonging to a phylogenetically isolated environmental clone group within the phylum Chloroflexi. At present, the name ‘Thermobaculum terrenum’ is not yet validly published as it contravenes Rule 30 (3a) of the Bacteriological Code. The bacterium was isolated from a slightly acidic extreme thermal soil in Yellowstone National Park, Wyoming (USA). Depending on its final taxonomic allocation, this is likely to be the third completed genome sequence of a member of the class Thermomicrobia and the seventh type strain genome from the phylum Chloroflexi. The 3,101,581 bp long genome with its 2,872 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035366 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30353662011-02-08 Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) Kiss, Hajnalka Cleland, David Lapidus, Alla Lucas, Susan Del Rio, Tijana Glavina Nolan, Matt Tice, Hope Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Lu, Megan Brettin, Thomas Detter, John C. Göker, Markus Tindall, Brian J. Beck, Brian McDermott, Timothy R. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Cheng, Jan-Fang Stand Genomic Sci Short Genome Reports ‘Thermobaculum terrenum’ Botero et al. 2004 is the sole species within the proposed genus ‘Thermobaculum’. Strain YNP1(T) is the only cultivated member of an acid tolerant, extremely thermophilic species belonging to a phylogenetically isolated environmental clone group within the phylum Chloroflexi. At present, the name ‘Thermobaculum terrenum’ is not yet validly published as it contravenes Rule 30 (3a) of the Bacteriological Code. The bacterium was isolated from a slightly acidic extreme thermal soil in Yellowstone National Park, Wyoming (USA). Depending on its final taxonomic allocation, this is likely to be the third completed genome sequence of a member of the class Thermomicrobia and the seventh type strain genome from the phylum Chloroflexi. The 3,101,581 bp long genome with its 2,872 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-10-27 /pmc/articles/PMC3035366/ /pubmed/21304745 http://dx.doi.org/10.4056/sigs.1153107 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Kiss, Hajnalka Cleland, David Lapidus, Alla Lucas, Susan Del Rio, Tijana Glavina Nolan, Matt Tice, Hope Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Lu, Megan Brettin, Thomas Detter, John C. Göker, Markus Tindall, Brian J. Beck, Brian McDermott, Timothy R. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Cheng, Jan-Fang Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) |
title | Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) |
title_full | Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) |
title_fullStr | Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) |
title_full_unstemmed | Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) |
title_short | Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1(T)) |
title_sort | complete genome sequence of ‘thermobaculum terrenum’ type strain (ynp1(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035366/ https://www.ncbi.nlm.nih.gov/pubmed/21304745 http://dx.doi.org/10.4056/sigs.1153107 |
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