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Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T))
Spirochaeta smaragdinae Magot et al. 1998 belongs to the family Spirochaetaceae. The species is Gram-negative, motile, obligately halophilic and strictly anaerobic and is of interest because it is able to ferment numerous polysaccharides. S. smaragdinae is the only species of the family Spirochaetac...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2010
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035371/ https://www.ncbi.nlm.nih.gov/pubmed/21304743 http://dx.doi.org/10.4056/sigs.1143106 |
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| author | Mavromatis, Konstantinos Yasawong, Montri Chertkov, Olga Lapidus, Alla Lucas, Susan Nolan, Matt Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Tapia, Roxanne Han, Cliff Bruce, David Goodwin, Lynne Pati, Amrita Chen, Ami Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Brambilla, Evelyne Spring, Stefan Göker, Markus Sikorski, Johannes Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
| author_facet | Mavromatis, Konstantinos Yasawong, Montri Chertkov, Olga Lapidus, Alla Lucas, Susan Nolan, Matt Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Tapia, Roxanne Han, Cliff Bruce, David Goodwin, Lynne Pati, Amrita Chen, Ami Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Brambilla, Evelyne Spring, Stefan Göker, Markus Sikorski, Johannes Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
| author_sort | Mavromatis, Konstantinos |
| collection | PubMed |
| description | Spirochaeta smaragdinae Magot et al. 1998 belongs to the family Spirochaetaceae. The species is Gram-negative, motile, obligately halophilic and strictly anaerobic and is of interest because it is able to ferment numerous polysaccharides. S. smaragdinae is the only species of the family Spirochaetaceae known to reduce thiosulfate or element sulfur to sulfide. This is the first complete genome sequence in the family Spirochaetaceae. The 4,653,970 bp long genome with its 4,363 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
| format | Text |
| id | pubmed-3035371 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2010 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-30353712011-02-08 Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) Mavromatis, Konstantinos Yasawong, Montri Chertkov, Olga Lapidus, Alla Lucas, Susan Nolan, Matt Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Tapia, Roxanne Han, Cliff Bruce, David Goodwin, Lynne Pati, Amrita Chen, Ami Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Brambilla, Evelyne Spring, Stefan Göker, Markus Sikorski, Johannes Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Spirochaeta smaragdinae Magot et al. 1998 belongs to the family Spirochaetaceae. The species is Gram-negative, motile, obligately halophilic and strictly anaerobic and is of interest because it is able to ferment numerous polysaccharides. S. smaragdinae is the only species of the family Spirochaetaceae known to reduce thiosulfate or element sulfur to sulfide. This is the first complete genome sequence in the family Spirochaetaceae. The 4,653,970 bp long genome with its 4,363 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2010-10-18 /pmc/articles/PMC3035371/ /pubmed/21304743 http://dx.doi.org/10.4056/sigs.1143106 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Mavromatis, Konstantinos Yasawong, Montri Chertkov, Olga Lapidus, Alla Lucas, Susan Nolan, Matt Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Pitluck, Sam Liolios, Konstantinos Ivanova, Natalia Tapia, Roxanne Han, Cliff Bruce, David Goodwin, Lynne Pati, Amrita Chen, Ami Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Detter, John C. Rohde, Manfred Brambilla, Evelyne Spring, Stefan Göker, Markus Sikorski, Johannes Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) |
| title | Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) |
| title_full | Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) |
| title_fullStr | Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) |
| title_full_unstemmed | Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) |
| title_short | Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228(T)) |
| title_sort | complete genome sequence of spirochaeta smaragdinae type strain (sebr 4228(t)) |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035371/ https://www.ncbi.nlm.nih.gov/pubmed/21304743 http://dx.doi.org/10.4056/sigs.1143106 |
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