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Theoretical and empirical quality assessment of transcription factor-binding motifs
Position-specific scoring matrices (PSSMs) are routinely used to predict transcription factor (TF)-binding sites in genome sequences. However, their reliability to predict novel binding sites can be far from optimum, due to the use of a small number of training sites or the inappropriate choice of p...
Autores principales: | Medina-Rivera, Alejandra, Abreu-Goodger, Cei, Thomas-Chollier, Morgane, Salgado, Heladia, Collado-Vides, Julio, van Helden, Jacques |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035439/ https://www.ncbi.nlm.nih.gov/pubmed/20923783 http://dx.doi.org/10.1093/nar/gkq710 |
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