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DNA barcoding of Brazilian sea turtles (Testudines)

Five out of the seven recognized species of sea turtles (Testudines) occur on the Brazilian coast. The Barcode Initiative is an effort to undertake a molecular inventory of Earth biodiversity. Cytochrome Oxidase c subunit I (COI) molecular tags for sea turtle species have not yet been described. In...

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Detalles Bibliográficos
Autores principales: Vargas, Sarah M., Araújo, Flávia C. F., Santos, Fabrício R.
Formato: Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3036055/
https://www.ncbi.nlm.nih.gov/pubmed/21637526
http://dx.doi.org/10.1590/S1415-47572009005000050
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author Vargas, Sarah M.
Araújo, Flávia C. F.
Santos, Fabrício R.
author_facet Vargas, Sarah M.
Araújo, Flávia C. F.
Santos, Fabrício R.
author_sort Vargas, Sarah M.
collection PubMed
description Five out of the seven recognized species of sea turtles (Testudines) occur on the Brazilian coast. The Barcode Initiative is an effort to undertake a molecular inventory of Earth biodiversity. Cytochrome Oxidase c subunit I (COI) molecular tags for sea turtle species have not yet been described. In this study, COI sequences for the five species of sea turtles that occur in Brazil were generated. These presented widely divergent haplotypes. All observed values were on the same range as those already described for other animal groups: the overall mean distance was 8.2%, the mean distance between families (Dermochelyidae and Cheloniidae) 11.7%, the mean intraspecific divergence 0.34%, and the mean distance within Cheloniidae 6.4%, this being 19-fold higher than the mean divergence observed within species. We obtained species-specific COI barcode tags that can be used for identifying each of the marine turtle species studied.
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spelling pubmed-30360552011-06-02 DNA barcoding of Brazilian sea turtles (Testudines) Vargas, Sarah M. Araújo, Flávia C. F. Santos, Fabrício R. Genet Mol Biol Evolutionary Genetics Five out of the seven recognized species of sea turtles (Testudines) occur on the Brazilian coast. The Barcode Initiative is an effort to undertake a molecular inventory of Earth biodiversity. Cytochrome Oxidase c subunit I (COI) molecular tags for sea turtle species have not yet been described. In this study, COI sequences for the five species of sea turtles that occur in Brazil were generated. These presented widely divergent haplotypes. All observed values were on the same range as those already described for other animal groups: the overall mean distance was 8.2%, the mean distance between families (Dermochelyidae and Cheloniidae) 11.7%, the mean intraspecific divergence 0.34%, and the mean distance within Cheloniidae 6.4%, this being 19-fold higher than the mean divergence observed within species. We obtained species-specific COI barcode tags that can be used for identifying each of the marine turtle species studied. Sociedade Brasileira de Genética 2009 2009-09-01 /pmc/articles/PMC3036055/ /pubmed/21637526 http://dx.doi.org/10.1590/S1415-47572009005000050 Text en Copyright © 2009, Sociedade Brasileira de Genética. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Evolutionary Genetics
Vargas, Sarah M.
Araújo, Flávia C. F.
Santos, Fabrício R.
DNA barcoding of Brazilian sea turtles (Testudines)
title DNA barcoding of Brazilian sea turtles (Testudines)
title_full DNA barcoding of Brazilian sea turtles (Testudines)
title_fullStr DNA barcoding of Brazilian sea turtles (Testudines)
title_full_unstemmed DNA barcoding of Brazilian sea turtles (Testudines)
title_short DNA barcoding of Brazilian sea turtles (Testudines)
title_sort dna barcoding of brazilian sea turtles (testudines)
topic Evolutionary Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3036055/
https://www.ncbi.nlm.nih.gov/pubmed/21637526
http://dx.doi.org/10.1590/S1415-47572009005000050
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