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Comparative microarray data analysis for the expression of genes in the pathway of glioma

Our present work focuses on the set of genes, which are involved in primary brain tumors ‐ the glioma pathway. These gliomas are mostly malignant (cancerous) in nature and are difficult to be cured and that’s why they attract the attention of all the workers. To understand the relative functionality...

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Autores principales: Katara, Pramod, Sharma, Neeru, Sharma, Sugandha, Khatri, Indu, Kaushik, Akansha, Kaushal, Lalima, sharma, Vinay
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3040002/
https://www.ncbi.nlm.nih.gov/pubmed/21346876
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author Katara, Pramod
Sharma, Neeru
Sharma, Sugandha
Khatri, Indu
Kaushik, Akansha
Kaushal, Lalima
sharma, Vinay
author_facet Katara, Pramod
Sharma, Neeru
Sharma, Sugandha
Khatri, Indu
Kaushik, Akansha
Kaushal, Lalima
sharma, Vinay
author_sort Katara, Pramod
collection PubMed
description Our present work focuses on the set of genes, which are involved in primary brain tumors ‐ the glioma pathway. These gliomas are mostly malignant (cancerous) in nature and are difficult to be cured and that’s why they attract the attention of all the workers. To understand the relative functionality of these genes, we analyzed the expression pattern of all genes, using gene expression data, at genomic level, and then to check their universality in all other cancers, we compared their expression levels and patterns in all other types of cancers by using gene expression graphs, and observed their expression levels in all these cancers, whether they are over or under expressed. We found that every gene has its own unique expression pattern and level and on that basis it can be classified. We also found that oncogenes and tumor suppressor genes that were involved in the glioma pathway were showing similar expression patterns in other cancers too but their expression level is low.
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spelling pubmed-30400022011-02-23 Comparative microarray data analysis for the expression of genes in the pathway of glioma Katara, Pramod Sharma, Neeru Sharma, Sugandha Khatri, Indu Kaushik, Akansha Kaushal, Lalima sharma, Vinay Bioinformation Hypothesis Our present work focuses on the set of genes, which are involved in primary brain tumors ‐ the glioma pathway. These gliomas are mostly malignant (cancerous) in nature and are difficult to be cured and that’s why they attract the attention of all the workers. To understand the relative functionality of these genes, we analyzed the expression pattern of all genes, using gene expression data, at genomic level, and then to check their universality in all other cancers, we compared their expression levels and patterns in all other types of cancers by using gene expression graphs, and observed their expression levels in all these cancers, whether they are over or under expressed. We found that every gene has its own unique expression pattern and level and on that basis it can be classified. We also found that oncogenes and tumor suppressor genes that were involved in the glioma pathway were showing similar expression patterns in other cancers too but their expression level is low. Biomedical Informatics 2010-06-24 /pmc/articles/PMC3040002/ /pubmed/21346876 Text en © 2010 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Katara, Pramod
Sharma, Neeru
Sharma, Sugandha
Khatri, Indu
Kaushik, Akansha
Kaushal, Lalima
sharma, Vinay
Comparative microarray data analysis for the expression of genes in the pathway of glioma
title Comparative microarray data analysis for the expression of genes in the pathway of glioma
title_full Comparative microarray data analysis for the expression of genes in the pathway of glioma
title_fullStr Comparative microarray data analysis for the expression of genes in the pathway of glioma
title_full_unstemmed Comparative microarray data analysis for the expression of genes in the pathway of glioma
title_short Comparative microarray data analysis for the expression of genes in the pathway of glioma
title_sort comparative microarray data analysis for the expression of genes in the pathway of glioma
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3040002/
https://www.ncbi.nlm.nih.gov/pubmed/21346876
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