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Transfer entropy—a model-free measure of effective connectivity for the neurosciences
Understanding causal relationships, or effective connectivity, between parts of the brain is of utmost importance because a large part of the brain’s activity is thought to be internally generated and, hence, quantifying stimulus response relationships alone does not fully describe brain dynamics. P...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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Springer US
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3040354/ https://www.ncbi.nlm.nih.gov/pubmed/20706781 http://dx.doi.org/10.1007/s10827-010-0262-3 |
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author | Vicente, Raul Wibral, Michael Lindner, Michael Pipa, Gordon |
author_facet | Vicente, Raul Wibral, Michael Lindner, Michael Pipa, Gordon |
author_sort | Vicente, Raul |
collection | PubMed |
description | Understanding causal relationships, or effective connectivity, between parts of the brain is of utmost importance because a large part of the brain’s activity is thought to be internally generated and, hence, quantifying stimulus response relationships alone does not fully describe brain dynamics. Past efforts to determine effective connectivity mostly relied on model based approaches such as Granger causality or dynamic causal modeling. Transfer entropy (TE) is an alternative measure of effective connectivity based on information theory. TE does not require a model of the interaction and is inherently non-linear. We investigated the applicability of TE as a metric in a test for effective connectivity to electrophysiological data based on simulations and magnetoencephalography (MEG) recordings in a simple motor task. In particular, we demonstrate that TE improved the detectability of effective connectivity for non-linear interactions, and for sensor level MEG signals where linear methods are hampered by signal-cross-talk due to volume conduction. |
format | Text |
id | pubmed-3040354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-30403542011-03-29 Transfer entropy—a model-free measure of effective connectivity for the neurosciences Vicente, Raul Wibral, Michael Lindner, Michael Pipa, Gordon J Comput Neurosci Article Understanding causal relationships, or effective connectivity, between parts of the brain is of utmost importance because a large part of the brain’s activity is thought to be internally generated and, hence, quantifying stimulus response relationships alone does not fully describe brain dynamics. Past efforts to determine effective connectivity mostly relied on model based approaches such as Granger causality or dynamic causal modeling. Transfer entropy (TE) is an alternative measure of effective connectivity based on information theory. TE does not require a model of the interaction and is inherently non-linear. We investigated the applicability of TE as a metric in a test for effective connectivity to electrophysiological data based on simulations and magnetoencephalography (MEG) recordings in a simple motor task. In particular, we demonstrate that TE improved the detectability of effective connectivity for non-linear interactions, and for sensor level MEG signals where linear methods are hampered by signal-cross-talk due to volume conduction. Springer US 2010-08-13 2011 /pmc/articles/PMC3040354/ /pubmed/20706781 http://dx.doi.org/10.1007/s10827-010-0262-3 Text en © The Author(s) 2010 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Article Vicente, Raul Wibral, Michael Lindner, Michael Pipa, Gordon Transfer entropy—a model-free measure of effective connectivity for the neurosciences |
title | Transfer entropy—a model-free measure of effective connectivity for the neurosciences |
title_full | Transfer entropy—a model-free measure of effective connectivity for the neurosciences |
title_fullStr | Transfer entropy—a model-free measure of effective connectivity for the neurosciences |
title_full_unstemmed | Transfer entropy—a model-free measure of effective connectivity for the neurosciences |
title_short | Transfer entropy—a model-free measure of effective connectivity for the neurosciences |
title_sort | transfer entropy—a model-free measure of effective connectivity for the neurosciences |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3040354/ https://www.ncbi.nlm.nih.gov/pubmed/20706781 http://dx.doi.org/10.1007/s10827-010-0262-3 |
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