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High AU content: a signature of upregulated miRNA in cardiac diseases

MicroRNAs have been implicated for the regulation of gene expression. These miRNA are a class of single stranded non coding RNAs, formed from endogenous transcripts and measure typically about 19-25 nucleotides in length. They are important regulators of the various biological and metabolic function...

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Detalles Bibliográficos
Autores principales: Gupta, Richa, Soni, Neha, Patnaik, Purbasa, Sood, Ishita, Singh, Rahul, Rawal, Kamal, Rani, Vibha
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3040488/
https://www.ncbi.nlm.nih.gov/pubmed/21364793
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author Gupta, Richa
Soni, Neha
Patnaik, Purbasa
Sood, Ishita
Singh, Rahul
Rawal, Kamal
Rani, Vibha
author_facet Gupta, Richa
Soni, Neha
Patnaik, Purbasa
Sood, Ishita
Singh, Rahul
Rawal, Kamal
Rani, Vibha
author_sort Gupta, Richa
collection PubMed
description MicroRNAs have been implicated for the regulation of gene expression. These miRNA are a class of single stranded non coding RNAs, formed from endogenous transcripts and measure typically about 19-25 nucleotides in length. They are important regulators of the various biological and metabolic functions taking place in humans. Many miRNAs show tissue specific expression. Human heart is a complex organ which during various diseased and developed conditions shows differential expression of miRNA. Here, we overview the recent findings on miRNA in cardiac diseases and report the presence of high AU content in differentially expressed miRNA in developed and diseased condition of heart as compared to all the miRNA present in the human. A total of 905 human miRNA sequences taken from miRBase were computationally analyzed. Trend analysis was performed to study the influence of positional frequency of the nucleotides. This study will help us in understanding the significance of AU rich elements in miRNA during the development of cardiac diseases.
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spelling pubmed-30404882011-03-01 High AU content: a signature of upregulated miRNA in cardiac diseases Gupta, Richa Soni, Neha Patnaik, Purbasa Sood, Ishita Singh, Rahul Rawal, Kamal Rani, Vibha Bioinformation Hypothesis MicroRNAs have been implicated for the regulation of gene expression. These miRNA are a class of single stranded non coding RNAs, formed from endogenous transcripts and measure typically about 19-25 nucleotides in length. They are important regulators of the various biological and metabolic functions taking place in humans. Many miRNAs show tissue specific expression. Human heart is a complex organ which during various diseased and developed conditions shows differential expression of miRNA. Here, we overview the recent findings on miRNA in cardiac diseases and report the presence of high AU content in differentially expressed miRNA in developed and diseased condition of heart as compared to all the miRNA present in the human. A total of 905 human miRNA sequences taken from miRBase were computationally analyzed. Trend analysis was performed to study the influence of positional frequency of the nucleotides. This study will help us in understanding the significance of AU rich elements in miRNA during the development of cardiac diseases. Biomedical Informatics 2010-09-20 /pmc/articles/PMC3040488/ /pubmed/21364793 Text en © 2010 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Gupta, Richa
Soni, Neha
Patnaik, Purbasa
Sood, Ishita
Singh, Rahul
Rawal, Kamal
Rani, Vibha
High AU content: a signature of upregulated miRNA in cardiac diseases
title High AU content: a signature of upregulated miRNA in cardiac diseases
title_full High AU content: a signature of upregulated miRNA in cardiac diseases
title_fullStr High AU content: a signature of upregulated miRNA in cardiac diseases
title_full_unstemmed High AU content: a signature of upregulated miRNA in cardiac diseases
title_short High AU content: a signature of upregulated miRNA in cardiac diseases
title_sort high au content: a signature of upregulated mirna in cardiac diseases
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3040488/
https://www.ncbi.nlm.nih.gov/pubmed/21364793
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