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SeqCalc: A portable bioinformatics software for sequence analysis

Rapid genome sequencing enriched biological databases with enormous sequence data. Yet it remains a daunting task to unravel this information. However experimental and computational researchers lead their own way in analyzing sequence information. Here we introduce a standalone portable tool named “...

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Detalles Bibliográficos
Autores principales: Vignesh, Dhandapani, Parameswari, Paul, Jin, Kim Hae, Pyo, Lim Yong
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041003/
https://www.ncbi.nlm.nih.gov/pubmed/21364786
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author Vignesh, Dhandapani
Parameswari, Paul
Jin, Kim Hae
Pyo, Lim Yong
author_facet Vignesh, Dhandapani
Parameswari, Paul
Jin, Kim Hae
Pyo, Lim Yong
author_sort Vignesh, Dhandapani
collection PubMed
description Rapid genome sequencing enriched biological databases with enormous sequence data. Yet it remains a daunting task to unravel this information. However experimental and computational researchers lead their own way in analyzing sequence information. Here we introduce a standalone portable tool named “SeqCalc” that would assist the research personnel in computational sequence analysis and automated experimental calculations. Although several tools are available online for sequence analysis they serve only for one or two purposes. SeqCalc is a package of offline program, developed using Perl and TCL/Tk scripts that serve ten different applications. This tool would be an initiative to both experimental and computational researchers in their routine research. SeqCalc is executable in all windows operating systems. AVAILABILITY: SeqCalc can be freely downloaded at http://code.google.com/p/seqcalc.
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spelling pubmed-30410032011-03-01 SeqCalc: A portable bioinformatics software for sequence analysis Vignesh, Dhandapani Parameswari, Paul Jin, Kim Hae Pyo, Lim Yong Bioinformation Software Rapid genome sequencing enriched biological databases with enormous sequence data. Yet it remains a daunting task to unravel this information. However experimental and computational researchers lead their own way in analyzing sequence information. Here we introduce a standalone portable tool named “SeqCalc” that would assist the research personnel in computational sequence analysis and automated experimental calculations. Although several tools are available online for sequence analysis they serve only for one or two purposes. SeqCalc is a package of offline program, developed using Perl and TCL/Tk scripts that serve ten different applications. This tool would be an initiative to both experimental and computational researchers in their routine research. SeqCalc is executable in all windows operating systems. AVAILABILITY: SeqCalc can be freely downloaded at http://code.google.com/p/seqcalc. Biomedical Informatics 2010-09-20 /pmc/articles/PMC3041003/ /pubmed/21364786 Text en © 2010 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Software
Vignesh, Dhandapani
Parameswari, Paul
Jin, Kim Hae
Pyo, Lim Yong
SeqCalc: A portable bioinformatics software for sequence analysis
title SeqCalc: A portable bioinformatics software for sequence analysis
title_full SeqCalc: A portable bioinformatics software for sequence analysis
title_fullStr SeqCalc: A portable bioinformatics software for sequence analysis
title_full_unstemmed SeqCalc: A portable bioinformatics software for sequence analysis
title_short SeqCalc: A portable bioinformatics software for sequence analysis
title_sort seqcalc: a portable bioinformatics software for sequence analysis
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041003/
https://www.ncbi.nlm.nih.gov/pubmed/21364786
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