Cargando…

Mining to find the lipid interaction networks involved in Ovarian Cancers

The role of lipids in cancer during the genesis, progression and subsequent metastasis stages is increasingly discussed in the scientific literature. This information is discussed in a wide range of journals making it difficult for researchers to track the latest developments. A comprehensive assess...

Descripción completa

Detalles Bibliográficos
Autores principales: Kanagasabai, Rajaraman, Narasimhan, Kothandaraman, Low, Hong-Sang, Ang, Wee Tiong, Fernandis, Aaron Z., Wenk, Markus R., Choolani, Mahesh A., Baker, Christopher J. O.
Formato: Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041567/
https://www.ncbi.nlm.nih.gov/pubmed/21347172
_version_ 1782198448938811392
author Kanagasabai, Rajaraman
Narasimhan, Kothandaraman
Low, Hong-Sang
Ang, Wee Tiong
Fernandis, Aaron Z.
Wenk, Markus R.
Choolani, Mahesh A.
Baker, Christopher J. O.
author_facet Kanagasabai, Rajaraman
Narasimhan, Kothandaraman
Low, Hong-Sang
Ang, Wee Tiong
Fernandis, Aaron Z.
Wenk, Markus R.
Choolani, Mahesh A.
Baker, Christopher J. O.
author_sort Kanagasabai, Rajaraman
collection PubMed
description The role of lipids in cancer during the genesis, progression and subsequent metastasis stages is increasingly discussed in the scientific literature. This information is discussed in a wide range of journals making it difficult for researchers to track the latest developments. A comprehensive assessment and translation of the lipidome of ovarian cancer, originating from literature, has yet to be made. We illustrate the deployment of semantic technologies; lipid ontology and text mining, in the aggregation and coordination of lipid literature. We provide the first report on the roles and types of lipids involved in ovarian cancer based on the mining of literature and identify key lipid-protein interactions that may point to potential drug discovery targets.
format Text
id pubmed-3041567
institution National Center for Biotechnology Information
language English
publishDate 2009
publisher American Medical Informatics Association
record_format MEDLINE/PubMed
spelling pubmed-30415672011-02-23 Mining to find the lipid interaction networks involved in Ovarian Cancers Kanagasabai, Rajaraman Narasimhan, Kothandaraman Low, Hong-Sang Ang, Wee Tiong Fernandis, Aaron Z. Wenk, Markus R. Choolani, Mahesh A. Baker, Christopher J. O. Summit on Translat Bioinforma Articles The role of lipids in cancer during the genesis, progression and subsequent metastasis stages is increasingly discussed in the scientific literature. This information is discussed in a wide range of journals making it difficult for researchers to track the latest developments. A comprehensive assessment and translation of the lipidome of ovarian cancer, originating from literature, has yet to be made. We illustrate the deployment of semantic technologies; lipid ontology and text mining, in the aggregation and coordination of lipid literature. We provide the first report on the roles and types of lipids involved in ovarian cancer based on the mining of literature and identify key lipid-protein interactions that may point to potential drug discovery targets. American Medical Informatics Association 2009-03-01 /pmc/articles/PMC3041567/ /pubmed/21347172 Text en ©2009 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Kanagasabai, Rajaraman
Narasimhan, Kothandaraman
Low, Hong-Sang
Ang, Wee Tiong
Fernandis, Aaron Z.
Wenk, Markus R.
Choolani, Mahesh A.
Baker, Christopher J. O.
Mining to find the lipid interaction networks involved in Ovarian Cancers
title Mining to find the lipid interaction networks involved in Ovarian Cancers
title_full Mining to find the lipid interaction networks involved in Ovarian Cancers
title_fullStr Mining to find the lipid interaction networks involved in Ovarian Cancers
title_full_unstemmed Mining to find the lipid interaction networks involved in Ovarian Cancers
title_short Mining to find the lipid interaction networks involved in Ovarian Cancers
title_sort mining to find the lipid interaction networks involved in ovarian cancers
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041567/
https://www.ncbi.nlm.nih.gov/pubmed/21347172
work_keys_str_mv AT kanagasabairajaraman miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT narasimhankothandaraman miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT lowhongsang miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT angweetiong miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT fernandisaaronz miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT wenkmarkusr miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT choolanimahesha miningtofindthelipidinteractionnetworksinvolvedinovariancancers
AT bakerchristopherjo miningtofindthelipidinteractionnetworksinvolvedinovariancancers