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Mining to find the lipid interaction networks involved in Ovarian Cancers
The role of lipids in cancer during the genesis, progression and subsequent metastasis stages is increasingly discussed in the scientific literature. This information is discussed in a wide range of journals making it difficult for researchers to track the latest developments. A comprehensive assess...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041567/ https://www.ncbi.nlm.nih.gov/pubmed/21347172 |
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author | Kanagasabai, Rajaraman Narasimhan, Kothandaraman Low, Hong-Sang Ang, Wee Tiong Fernandis, Aaron Z. Wenk, Markus R. Choolani, Mahesh A. Baker, Christopher J. O. |
author_facet | Kanagasabai, Rajaraman Narasimhan, Kothandaraman Low, Hong-Sang Ang, Wee Tiong Fernandis, Aaron Z. Wenk, Markus R. Choolani, Mahesh A. Baker, Christopher J. O. |
author_sort | Kanagasabai, Rajaraman |
collection | PubMed |
description | The role of lipids in cancer during the genesis, progression and subsequent metastasis stages is increasingly discussed in the scientific literature. This information is discussed in a wide range of journals making it difficult for researchers to track the latest developments. A comprehensive assessment and translation of the lipidome of ovarian cancer, originating from literature, has yet to be made. We illustrate the deployment of semantic technologies; lipid ontology and text mining, in the aggregation and coordination of lipid literature. We provide the first report on the roles and types of lipids involved in ovarian cancer based on the mining of literature and identify key lipid-protein interactions that may point to potential drug discovery targets. |
format | Text |
id | pubmed-3041567 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-30415672011-02-23 Mining to find the lipid interaction networks involved in Ovarian Cancers Kanagasabai, Rajaraman Narasimhan, Kothandaraman Low, Hong-Sang Ang, Wee Tiong Fernandis, Aaron Z. Wenk, Markus R. Choolani, Mahesh A. Baker, Christopher J. O. Summit on Translat Bioinforma Articles The role of lipids in cancer during the genesis, progression and subsequent metastasis stages is increasingly discussed in the scientific literature. This information is discussed in a wide range of journals making it difficult for researchers to track the latest developments. A comprehensive assessment and translation of the lipidome of ovarian cancer, originating from literature, has yet to be made. We illustrate the deployment of semantic technologies; lipid ontology and text mining, in the aggregation and coordination of lipid literature. We provide the first report on the roles and types of lipids involved in ovarian cancer based on the mining of literature and identify key lipid-protein interactions that may point to potential drug discovery targets. American Medical Informatics Association 2009-03-01 /pmc/articles/PMC3041567/ /pubmed/21347172 Text en ©2009 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Kanagasabai, Rajaraman Narasimhan, Kothandaraman Low, Hong-Sang Ang, Wee Tiong Fernandis, Aaron Z. Wenk, Markus R. Choolani, Mahesh A. Baker, Christopher J. O. Mining to find the lipid interaction networks involved in Ovarian Cancers |
title | Mining to find the lipid interaction networks involved in Ovarian Cancers |
title_full | Mining to find the lipid interaction networks involved in Ovarian Cancers |
title_fullStr | Mining to find the lipid interaction networks involved in Ovarian Cancers |
title_full_unstemmed | Mining to find the lipid interaction networks involved in Ovarian Cancers |
title_short | Mining to find the lipid interaction networks involved in Ovarian Cancers |
title_sort | mining to find the lipid interaction networks involved in ovarian cancers |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041567/ https://www.ncbi.nlm.nih.gov/pubmed/21347172 |
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