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Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles
BACKGROUND: As the size and complexity of scientific datasets and the corresponding information stores grow, standards for collecting, describing, formatting, submitting and exchanging information are playing an increasingly active role. Several initiatives occupy strategic positions in the internat...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041584/ https://www.ncbi.nlm.nih.gov/pubmed/21347181 |
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author | Sansone, Susanna-Assunta Rocca-Serra, Philippe Field, Dawn Taylor, Chris F Tong, Weida Brandizi, Marco Maguire, Eamonn Sklyar, Nataliya |
author_facet | Sansone, Susanna-Assunta Rocca-Serra, Philippe Field, Dawn Taylor, Chris F Tong, Weida Brandizi, Marco Maguire, Eamonn Sklyar, Nataliya |
author_sort | Sansone, Susanna-Assunta |
collection | PubMed |
description | BACKGROUND: As the size and complexity of scientific datasets and the corresponding information stores grow, standards for collecting, describing, formatting, submitting and exchanging information are playing an increasingly active role. Several initiatives occupy strategic positions in the international scenario, both within and across domains. However, the job of harmonising reporting standards is still very much a work in progress; both software interoperability and the data integration remain challenging as things stand. RESULTS: The status quo with respect to standardization initiatives is summarized here, with particular emphasis on the motivation for, and the challenges of, ongoing synergistic activities amongst the academic community focused on the creation of truly interoperable standards. CONCLUSIONS: Groups generating standards should engage with ongoing cross-domain activities to simplify the integration of heterogeneous data sets to the greatest possible extent. |
format | Text |
id | pubmed-3041584 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-30415842011-02-23 Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles Sansone, Susanna-Assunta Rocca-Serra, Philippe Field, Dawn Taylor, Chris F Tong, Weida Brandizi, Marco Maguire, Eamonn Sklyar, Nataliya Summit on Translat Bioinforma Articles BACKGROUND: As the size and complexity of scientific datasets and the corresponding information stores grow, standards for collecting, describing, formatting, submitting and exchanging information are playing an increasingly active role. Several initiatives occupy strategic positions in the international scenario, both within and across domains. However, the job of harmonising reporting standards is still very much a work in progress; both software interoperability and the data integration remain challenging as things stand. RESULTS: The status quo with respect to standardization initiatives is summarized here, with particular emphasis on the motivation for, and the challenges of, ongoing synergistic activities amongst the academic community focused on the creation of truly interoperable standards. CONCLUSIONS: Groups generating standards should engage with ongoing cross-domain activities to simplify the integration of heterogeneous data sets to the greatest possible extent. American Medical Informatics Association 2009-03-01 /pmc/articles/PMC3041584/ /pubmed/21347181 Text en ©2009 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Sansone, Susanna-Assunta Rocca-Serra, Philippe Field, Dawn Taylor, Chris F Tong, Weida Brandizi, Marco Maguire, Eamonn Sklyar, Nataliya Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles |
title | Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles |
title_full | Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles |
title_fullStr | Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles |
title_full_unstemmed | Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles |
title_short | Towards Interoperable Reporting Standards for Omics Data: Hopes and Hurdles |
title_sort | towards interoperable reporting standards for omics data: hopes and hurdles |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041584/ https://www.ncbi.nlm.nih.gov/pubmed/21347181 |
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