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Molecular identification of Mango, Mangifera indica L.var. totupura
Mango (>Mangifera indica) belonging to Anacardiaceae family is a fruit that grows in tropical regions. It is considered as the King of fruits. The present work was taken up to identify a tool in identifying the mango species at the molecular level. The chloroplast trnL-F region was amplified from...
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Formato: | Texto |
Lenguaje: | English |
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Biomedical Informatics
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3055156/ https://www.ncbi.nlm.nih.gov/pubmed/21423885 |
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author | Jagarlamudi, Sankar G, Rosaiah Kurapati, Ravi Kumar Pinnamaneni, Rajasekhar |
author_facet | Jagarlamudi, Sankar G, Rosaiah Kurapati, Ravi Kumar Pinnamaneni, Rajasekhar |
author_sort | Jagarlamudi, Sankar |
collection | PubMed |
description | Mango (>Mangifera indica) belonging to Anacardiaceae family is a fruit that grows in tropical regions. It is considered as the King of fruits. The present work was taken up to identify a tool in identifying the mango species at the molecular level. The chloroplast trnL-F region was amplified from extracted total genomic DNA using the polymerase chain reaction (PCR) and sequenced. Sequence of the dominant DGGE band revealed that Mangifera indica in tested leaves was Mangifera indica (100% similarity to the ITS sequences of Mangifera indica). This sequence was deposited in NCBI with the accession no. GQ927757. ABBREVIATIONS: AFLP - Amplified fragment length polymorphism , cpDNA - Chloroplast DNA, DDGE - Denaturing gradient gel electrophoresis, DNA - Deoxyribo nucleic acid, EDTA - Ethylenediamine tetraacetic acid, HCl - Hydrochloric acid, ISSR - Inter simple sequence repeats, ITS - Internal transcribed spacer, MATAB - Methyl Ammonium Bromide, Na(2)SO(3) - Sodium sulphite, NaCl - Sodium chloride, NCBI - National Centre for Biotechnology Information, PCR - Polymerase chain reaction, PEG - Polyethylene glycol, RAPD - Randomly amplified polymorphic DNA, trnL-F - Transfer RNA genes start codon- termination codon. |
format | Text |
id | pubmed-3055156 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-30551562011-03-18 Molecular identification of Mango, Mangifera indica L.var. totupura Jagarlamudi, Sankar G, Rosaiah Kurapati, Ravi Kumar Pinnamaneni, Rajasekhar Bioinformation Hypothesis Mango (>Mangifera indica) belonging to Anacardiaceae family is a fruit that grows in tropical regions. It is considered as the King of fruits. The present work was taken up to identify a tool in identifying the mango species at the molecular level. The chloroplast trnL-F region was amplified from extracted total genomic DNA using the polymerase chain reaction (PCR) and sequenced. Sequence of the dominant DGGE band revealed that Mangifera indica in tested leaves was Mangifera indica (100% similarity to the ITS sequences of Mangifera indica). This sequence was deposited in NCBI with the accession no. GQ927757. ABBREVIATIONS: AFLP - Amplified fragment length polymorphism , cpDNA - Chloroplast DNA, DDGE - Denaturing gradient gel electrophoresis, DNA - Deoxyribo nucleic acid, EDTA - Ethylenediamine tetraacetic acid, HCl - Hydrochloric acid, ISSR - Inter simple sequence repeats, ITS - Internal transcribed spacer, MATAB - Methyl Ammonium Bromide, Na(2)SO(3) - Sodium sulphite, NaCl - Sodium chloride, NCBI - National Centre for Biotechnology Information, PCR - Polymerase chain reaction, PEG - Polyethylene glycol, RAPD - Randomly amplified polymorphic DNA, trnL-F - Transfer RNA genes start codon- termination codon. Biomedical Informatics 2011-02-15 /pmc/articles/PMC3055156/ /pubmed/21423885 Text en © 2011 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Jagarlamudi, Sankar G, Rosaiah Kurapati, Ravi Kumar Pinnamaneni, Rajasekhar Molecular identification of Mango, Mangifera indica L.var. totupura |
title | Molecular identification of Mango, Mangifera indica L.var. totupura |
title_full | Molecular identification of Mango, Mangifera indica L.var. totupura |
title_fullStr | Molecular identification of Mango, Mangifera indica L.var. totupura |
title_full_unstemmed | Molecular identification of Mango, Mangifera indica L.var. totupura |
title_short | Molecular identification of Mango, Mangifera indica L.var. totupura |
title_sort | molecular identification of mango, mangifera indica l.var. totupura |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3055156/ https://www.ncbi.nlm.nih.gov/pubmed/21423885 |
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