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A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data

BACKGROUND: Recent approaches mixing frequentist principles with Bayesian inference propose internal goodness-of-fit (GOF) p-values that might be valuable for critical analysis of Bayesian statistical models. However, GOF p-values developed to date only have known probability distributions under res...

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Autor principal: Gosselin, Frédéric
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3060804/
https://www.ncbi.nlm.nih.gov/pubmed/21445246
http://dx.doi.org/10.1371/journal.pone.0014770
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author Gosselin, Frédéric
author_facet Gosselin, Frédéric
author_sort Gosselin, Frédéric
collection PubMed
description BACKGROUND: Recent approaches mixing frequentist principles with Bayesian inference propose internal goodness-of-fit (GOF) p-values that might be valuable for critical analysis of Bayesian statistical models. However, GOF p-values developed to date only have known probability distributions under restrictive conditions. As a result, no known GOF p-value has a known probability distribution for any discrepancy function. METHODOLOGY/PRINCIPAL FINDINGS: We show mathematically that a new GOF p-value, called the sampled posterior p-value (SPP), asymptotically has a uniform probability distribution whatever the discrepancy function. In a moderate finite sample context, simulations also showed that the SPP appears stable to relatively uninformative misspecifications of the prior distribution. CONCLUSIONS/SIGNIFICANCE: These reasons, together with its numerical simplicity, make the SPP a better canonical GOF p-value than existing GOF p-values.
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spelling pubmed-30608042011-03-28 A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data Gosselin, Frédéric PLoS One Research Article BACKGROUND: Recent approaches mixing frequentist principles with Bayesian inference propose internal goodness-of-fit (GOF) p-values that might be valuable for critical analysis of Bayesian statistical models. However, GOF p-values developed to date only have known probability distributions under restrictive conditions. As a result, no known GOF p-value has a known probability distribution for any discrepancy function. METHODOLOGY/PRINCIPAL FINDINGS: We show mathematically that a new GOF p-value, called the sampled posterior p-value (SPP), asymptotically has a uniform probability distribution whatever the discrepancy function. In a moderate finite sample context, simulations also showed that the SPP appears stable to relatively uninformative misspecifications of the prior distribution. CONCLUSIONS/SIGNIFICANCE: These reasons, together with its numerical simplicity, make the SPP a better canonical GOF p-value than existing GOF p-values. Public Library of Science 2011-03-18 /pmc/articles/PMC3060804/ /pubmed/21445246 http://dx.doi.org/10.1371/journal.pone.0014770 Text en Frédéric Gosselin. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Gosselin, Frédéric
A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
title A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
title_full A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
title_fullStr A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
title_full_unstemmed A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
title_short A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
title_sort new calibrated bayesian internal goodness-of-fit method: sampled posterior p-values as simple and general p-values that allow double use of the data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3060804/
https://www.ncbi.nlm.nih.gov/pubmed/21445246
http://dx.doi.org/10.1371/journal.pone.0014770
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