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A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data
BACKGROUND: Recent approaches mixing frequentist principles with Bayesian inference propose internal goodness-of-fit (GOF) p-values that might be valuable for critical analysis of Bayesian statistical models. However, GOF p-values developed to date only have known probability distributions under res...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3060804/ https://www.ncbi.nlm.nih.gov/pubmed/21445246 http://dx.doi.org/10.1371/journal.pone.0014770 |
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author | Gosselin, Frédéric |
author_facet | Gosselin, Frédéric |
author_sort | Gosselin, Frédéric |
collection | PubMed |
description | BACKGROUND: Recent approaches mixing frequentist principles with Bayesian inference propose internal goodness-of-fit (GOF) p-values that might be valuable for critical analysis of Bayesian statistical models. However, GOF p-values developed to date only have known probability distributions under restrictive conditions. As a result, no known GOF p-value has a known probability distribution for any discrepancy function. METHODOLOGY/PRINCIPAL FINDINGS: We show mathematically that a new GOF p-value, called the sampled posterior p-value (SPP), asymptotically has a uniform probability distribution whatever the discrepancy function. In a moderate finite sample context, simulations also showed that the SPP appears stable to relatively uninformative misspecifications of the prior distribution. CONCLUSIONS/SIGNIFICANCE: These reasons, together with its numerical simplicity, make the SPP a better canonical GOF p-value than existing GOF p-values. |
format | Text |
id | pubmed-3060804 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-30608042011-03-28 A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data Gosselin, Frédéric PLoS One Research Article BACKGROUND: Recent approaches mixing frequentist principles with Bayesian inference propose internal goodness-of-fit (GOF) p-values that might be valuable for critical analysis of Bayesian statistical models. However, GOF p-values developed to date only have known probability distributions under restrictive conditions. As a result, no known GOF p-value has a known probability distribution for any discrepancy function. METHODOLOGY/PRINCIPAL FINDINGS: We show mathematically that a new GOF p-value, called the sampled posterior p-value (SPP), asymptotically has a uniform probability distribution whatever the discrepancy function. In a moderate finite sample context, simulations also showed that the SPP appears stable to relatively uninformative misspecifications of the prior distribution. CONCLUSIONS/SIGNIFICANCE: These reasons, together with its numerical simplicity, make the SPP a better canonical GOF p-value than existing GOF p-values. Public Library of Science 2011-03-18 /pmc/articles/PMC3060804/ /pubmed/21445246 http://dx.doi.org/10.1371/journal.pone.0014770 Text en Frédéric Gosselin. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Gosselin, Frédéric A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data |
title | A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data |
title_full | A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data |
title_fullStr | A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data |
title_full_unstemmed | A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data |
title_short | A New Calibrated Bayesian Internal Goodness-of-Fit Method: Sampled Posterior p-Values as Simple and General p-Values That Allow Double Use of the Data |
title_sort | new calibrated bayesian internal goodness-of-fit method: sampled posterior p-values as simple and general p-values that allow double use of the data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3060804/ https://www.ncbi.nlm.nih.gov/pubmed/21445246 http://dx.doi.org/10.1371/journal.pone.0014770 |
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