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Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand

There is a lack of diagnostic tests for leptospirosis in technology-restricted settings. We developed loop-mediated isothermal amplification (LAMP) specific for the 16S ribosomal RNA gene (rrs) of pathogenic and intermediate group Leptospira species. The lower limit of detection was 10 genomic equiv...

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Autores principales: Sonthayanon, Piengchan, Chierakul, Wirongrong, Wuthiekanun, Vanaporn, Thaipadungpanit, Janjira, Kalambaheti, Thareerat, Boonsilp, Siriphan, Amornchai, Premjit, Smythe, Lee D., Limmathurotsakul, Direk, Day, Nicholas P., Peacock, Sharon J.
Formato: Texto
Lenguaje:English
Publicado: The American Society of Tropical Medicine and Hygiene 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3062458/
https://www.ncbi.nlm.nih.gov/pubmed/21460019
http://dx.doi.org/10.4269/ajtmh.2011.10-0473
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author Sonthayanon, Piengchan
Chierakul, Wirongrong
Wuthiekanun, Vanaporn
Thaipadungpanit, Janjira
Kalambaheti, Thareerat
Boonsilp, Siriphan
Amornchai, Premjit
Smythe, Lee D.
Limmathurotsakul, Direk
Day, Nicholas P.
Peacock, Sharon J.
author_facet Sonthayanon, Piengchan
Chierakul, Wirongrong
Wuthiekanun, Vanaporn
Thaipadungpanit, Janjira
Kalambaheti, Thareerat
Boonsilp, Siriphan
Amornchai, Premjit
Smythe, Lee D.
Limmathurotsakul, Direk
Day, Nicholas P.
Peacock, Sharon J.
author_sort Sonthayanon, Piengchan
collection PubMed
description There is a lack of diagnostic tests for leptospirosis in technology-restricted settings. We developed loop-mediated isothermal amplification (LAMP) specific for the 16S ribosomal RNA gene (rrs) of pathogenic and intermediate group Leptospira species. The lower limit of detection was 10 genomic equivalents/reaction, and analytical specificity was high; we observed positive reactions for pathogenic/intermediate groups and negative reactions for non-pathogenic Leptospira species and other bacterial species. We evaluated this assay in Thailand by using a case–control study of 133 patients with laboratory-proven leptospirosis and 133 patients with other febrile illnesses. Using admission blood, we found that the rrs LAMP showed positive results in 58 of 133 cases (diagnostic sensitivity = 43.6, 95% confidence interval [CI] = 35.0–52.5) and in 22 of 133 controls (diagnostic specificity = 83.5, 95% CI = 76.0–89.3). Sensitivity was high for 39 patients who were culture positive for Leptospira spp. (84.6, 95% CI = 69.5–94.1). The rrs LAMP can provide an admission diagnosis in approximately half of patients with leptospirosis, but its clinical utility is reduced by a lower specificity.
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spelling pubmed-30624582011-04-05 Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand Sonthayanon, Piengchan Chierakul, Wirongrong Wuthiekanun, Vanaporn Thaipadungpanit, Janjira Kalambaheti, Thareerat Boonsilp, Siriphan Amornchai, Premjit Smythe, Lee D. Limmathurotsakul, Direk Day, Nicholas P. Peacock, Sharon J. Am J Trop Med Hyg Articles There is a lack of diagnostic tests for leptospirosis in technology-restricted settings. We developed loop-mediated isothermal amplification (LAMP) specific for the 16S ribosomal RNA gene (rrs) of pathogenic and intermediate group Leptospira species. The lower limit of detection was 10 genomic equivalents/reaction, and analytical specificity was high; we observed positive reactions for pathogenic/intermediate groups and negative reactions for non-pathogenic Leptospira species and other bacterial species. We evaluated this assay in Thailand by using a case–control study of 133 patients with laboratory-proven leptospirosis and 133 patients with other febrile illnesses. Using admission blood, we found that the rrs LAMP showed positive results in 58 of 133 cases (diagnostic sensitivity = 43.6, 95% confidence interval [CI] = 35.0–52.5) and in 22 of 133 controls (diagnostic specificity = 83.5, 95% CI = 76.0–89.3). Sensitivity was high for 39 patients who were culture positive for Leptospira spp. (84.6, 95% CI = 69.5–94.1). The rrs LAMP can provide an admission diagnosis in approximately half of patients with leptospirosis, but its clinical utility is reduced by a lower specificity. The American Society of Tropical Medicine and Hygiene 2011-04-05 /pmc/articles/PMC3062458/ /pubmed/21460019 http://dx.doi.org/10.4269/ajtmh.2011.10-0473 Text en ©The American Society of Tropical Medicine and Hygiene http://creativecommons.org/licenses/by/2.5/ This is an Open Access article distributed under the terms of the American Society of Tropical Medicine and Hygiene's Re-use License which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Sonthayanon, Piengchan
Chierakul, Wirongrong
Wuthiekanun, Vanaporn
Thaipadungpanit, Janjira
Kalambaheti, Thareerat
Boonsilp, Siriphan
Amornchai, Premjit
Smythe, Lee D.
Limmathurotsakul, Direk
Day, Nicholas P.
Peacock, Sharon J.
Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand
title Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand
title_full Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand
title_fullStr Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand
title_full_unstemmed Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand
title_short Accuracy of Loop-Mediated Isothermal Amplification for Diagnosis of Human Leptospirosis in Thailand
title_sort accuracy of loop-mediated isothermal amplification for diagnosis of human leptospirosis in thailand
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3062458/
https://www.ncbi.nlm.nih.gov/pubmed/21460019
http://dx.doi.org/10.4269/ajtmh.2011.10-0473
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