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The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma

BACKGROUND: Elevated glucose-regulated protein 78 (GRP78) levels in tissues have been known to be related with poor prognosis in hepatocellular carcinoma (HCC) patients. Though the variants in the 3′ untranslated region (UTR) of GRP78 gene were not associated with HCC risk, we wonder whether these p...

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Autores principales: Zhu, Xiao, Wang, Fang, Lin, Marie C. M., Tian, Linwei, Fan, Wenguo, Ng, Samuel S., Liu, Minjuan, Huang, Jianqing, Xu, Zhenhua, Li, Dongpei, Kung, Hsiangfu
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3062561/
https://www.ncbi.nlm.nih.gov/pubmed/21445355
http://dx.doi.org/10.1371/journal.pone.0017783
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author Zhu, Xiao
Wang, Fang
Lin, Marie C. M.
Tian, Linwei
Fan, Wenguo
Ng, Samuel S.
Liu, Minjuan
Huang, Jianqing
Xu, Zhenhua
Li, Dongpei
Kung, Hsiangfu
author_facet Zhu, Xiao
Wang, Fang
Lin, Marie C. M.
Tian, Linwei
Fan, Wenguo
Ng, Samuel S.
Liu, Minjuan
Huang, Jianqing
Xu, Zhenhua
Li, Dongpei
Kung, Hsiangfu
author_sort Zhu, Xiao
collection PubMed
description BACKGROUND: Elevated glucose-regulated protein 78 (GRP78) levels in tissues have been known to be related with poor prognosis in hepatocellular carcinoma (HCC) patients. Though the variants in the 3′ untranslated region (UTR) of GRP78 gene were not associated with HCC risk, we wonder whether these polymorphisms affect survival of HCC patients. METHODOLOGY/PRINCIPAL FINDINGS: Blood samples of HCC patients were maintained in our specimen bank between 1996 to 2003. DNA from 576 unrelated and resectable patients with HCC was typed for rs16927997 (T>C), rs1140763 (T>C) and rs12009 (T>C) by TaqMan assays. The Kaplan-Meier method and log-rank test were used to estimate overall survival. Linkage disequilibrium (LD) analysis identified a total of 3 haplotypes and 6 diplotypes in this region. The distribution of haplotype was not related to the clinical characteristics. Univariate analysis showed that the allele, genotype, haplotype and diplotype did not effect the survival. None of the clinical features show a significant association (P (correced)>0.05) with overall patient outcome in multiple comparisons. CONCLUSIONS/SIGNIFICANCE: There is no noteworthy influence of 3′ UTR variants in the GRP78 on prognosis of resectable HCC in the Chinese population.
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spelling pubmed-30625612011-03-28 The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma Zhu, Xiao Wang, Fang Lin, Marie C. M. Tian, Linwei Fan, Wenguo Ng, Samuel S. Liu, Minjuan Huang, Jianqing Xu, Zhenhua Li, Dongpei Kung, Hsiangfu PLoS One Research Article BACKGROUND: Elevated glucose-regulated protein 78 (GRP78) levels in tissues have been known to be related with poor prognosis in hepatocellular carcinoma (HCC) patients. Though the variants in the 3′ untranslated region (UTR) of GRP78 gene were not associated with HCC risk, we wonder whether these polymorphisms affect survival of HCC patients. METHODOLOGY/PRINCIPAL FINDINGS: Blood samples of HCC patients were maintained in our specimen bank between 1996 to 2003. DNA from 576 unrelated and resectable patients with HCC was typed for rs16927997 (T>C), rs1140763 (T>C) and rs12009 (T>C) by TaqMan assays. The Kaplan-Meier method and log-rank test were used to estimate overall survival. Linkage disequilibrium (LD) analysis identified a total of 3 haplotypes and 6 diplotypes in this region. The distribution of haplotype was not related to the clinical characteristics. Univariate analysis showed that the allele, genotype, haplotype and diplotype did not effect the survival. None of the clinical features show a significant association (P (correced)>0.05) with overall patient outcome in multiple comparisons. CONCLUSIONS/SIGNIFICANCE: There is no noteworthy influence of 3′ UTR variants in the GRP78 on prognosis of resectable HCC in the Chinese population. Public Library of Science 2011-03-22 /pmc/articles/PMC3062561/ /pubmed/21445355 http://dx.doi.org/10.1371/journal.pone.0017783 Text en Zhu et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zhu, Xiao
Wang, Fang
Lin, Marie C. M.
Tian, Linwei
Fan, Wenguo
Ng, Samuel S.
Liu, Minjuan
Huang, Jianqing
Xu, Zhenhua
Li, Dongpei
Kung, Hsiangfu
The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma
title The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma
title_full The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma
title_fullStr The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma
title_full_unstemmed The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma
title_short The 3′ UTR Variants in the GRP78 Are Not Associated with Overall Survival in Resectable Hepatocellular Carcinoma
title_sort 3′ utr variants in the grp78 are not associated with overall survival in resectable hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3062561/
https://www.ncbi.nlm.nih.gov/pubmed/21445355
http://dx.doi.org/10.1371/journal.pone.0017783
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