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Structural inferences for Cholera toxin mutations in Vibrio cholerae
Cholera is a global disease that has persisted for millennia. The cholera toxin (CT) from Vibrio cholerae is responsible for the clinical symptoms of cholera. This toxin is a hetero-hexamer (AB(5)) complex consisting of a subunit A (CTA) with a pentamer (B(5)) of subunit B (CTB). The importance of t...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Biomedical Informatics
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3064844/ https://www.ncbi.nlm.nih.gov/pubmed/21464837 |
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author | Shamini, Gunasagaran Ravichandran, Manickam Sinnott, John T Somboonwit, Charurut Sidhu, Harcharan S Shapshak, Paul Kangueane, Pandjassarame |
author_facet | Shamini, Gunasagaran Ravichandran, Manickam Sinnott, John T Somboonwit, Charurut Sidhu, Harcharan S Shapshak, Paul Kangueane, Pandjassarame |
author_sort | Shamini, Gunasagaran |
collection | PubMed |
description | Cholera is a global disease that has persisted for millennia. The cholera toxin (CT) from Vibrio cholerae is responsible for the clinical symptoms of cholera. This toxin is a hetero-hexamer (AB(5)) complex consisting of a subunit A (CTA) with a pentamer (B(5)) of subunit B (CTB). The importance of the AB(5) complex for pathogenesis is established for the wild type O1 serogroup using known structural and functional data. However, its role is not yet documented in other known serogroups harboring sequence level residue mutations. The sequences for the toxin from different serogroups are available in GenBank (release 177). Sequence analysis reveals mutations at several sequence positions in the toxin across serogroups. Therefore, it is of interest to locate the position of these mutations in the AB(5) structure to infer complex assembly for its functional role in different serogroups. We show that mutations in the CTA are at the solvent exposed regions of the AB(5) complex, whereas those in the CTB are at the CTB/CTB interface of the homo-pentamer complex. Thus, the role of mutations at the CTB/CTB interface for B(5) complex assembly is implied. It is observed that these mutations are often non-synonymous (e.g. polar to non-polar or vice versa). The formation of the AB(5) complex involves inter-subunit residue-residue interactions at the protein-protein interfaces. Hence, these mutations, at the structurally relevant positions, are of importance for the understanding of pathogenesis by several serogroups. This is also of significance in the improvement of recombinant CT protein complex analogs for vaccine design and their use against multiple serogroups. |
format | Text |
id | pubmed-3064844 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-30648442011-04-04 Structural inferences for Cholera toxin mutations in Vibrio cholerae Shamini, Gunasagaran Ravichandran, Manickam Sinnott, John T Somboonwit, Charurut Sidhu, Harcharan S Shapshak, Paul Kangueane, Pandjassarame Bioinformation Hypothesis Cholera is a global disease that has persisted for millennia. The cholera toxin (CT) from Vibrio cholerae is responsible for the clinical symptoms of cholera. This toxin is a hetero-hexamer (AB(5)) complex consisting of a subunit A (CTA) with a pentamer (B(5)) of subunit B (CTB). The importance of the AB(5) complex for pathogenesis is established for the wild type O1 serogroup using known structural and functional data. However, its role is not yet documented in other known serogroups harboring sequence level residue mutations. The sequences for the toxin from different serogroups are available in GenBank (release 177). Sequence analysis reveals mutations at several sequence positions in the toxin across serogroups. Therefore, it is of interest to locate the position of these mutations in the AB(5) structure to infer complex assembly for its functional role in different serogroups. We show that mutations in the CTA are at the solvent exposed regions of the AB(5) complex, whereas those in the CTB are at the CTB/CTB interface of the homo-pentamer complex. Thus, the role of mutations at the CTB/CTB interface for B(5) complex assembly is implied. It is observed that these mutations are often non-synonymous (e.g. polar to non-polar or vice versa). The formation of the AB(5) complex involves inter-subunit residue-residue interactions at the protein-protein interfaces. Hence, these mutations, at the structurally relevant positions, are of importance for the understanding of pathogenesis by several serogroups. This is also of significance in the improvement of recombinant CT protein complex analogs for vaccine design and their use against multiple serogroups. Biomedical Informatics 2011-03-02 /pmc/articles/PMC3064844/ /pubmed/21464837 Text en © 2011 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Shamini, Gunasagaran Ravichandran, Manickam Sinnott, John T Somboonwit, Charurut Sidhu, Harcharan S Shapshak, Paul Kangueane, Pandjassarame Structural inferences for Cholera toxin mutations in Vibrio cholerae |
title | Structural inferences for Cholera toxin mutations in Vibrio cholerae |
title_full | Structural inferences for Cholera toxin mutations in Vibrio cholerae |
title_fullStr | Structural inferences for Cholera toxin mutations in Vibrio cholerae |
title_full_unstemmed | Structural inferences for Cholera toxin mutations in Vibrio cholerae |
title_short | Structural inferences for Cholera toxin mutations in Vibrio cholerae |
title_sort | structural inferences for cholera toxin mutations in vibrio cholerae |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3064844/ https://www.ncbi.nlm.nih.gov/pubmed/21464837 |
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