Cargando…

Use of optical mapping to sort uropathogenic Escherichia coli strains into distinct subgroups

Optical maps were generated for 33 uropathogenic Escherichia coli (UPEC) isolates. For individual genomes, the NcoI restriction fragments aligned into a unique chromosome map for each individual isolate, which was then compared with the in silico restriction maps of all of the sequenced E. coli and...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schwan, William R., Briska, Adam, Stahl, Buffy, Wagner, Trevor K., Zentz, Emily, Henkhaus, John, Lovrich, Steven D., Agger, William A., Callister, Steven M., DuChateau, Brian, Dykes, Colin W.
Formato:	Texto
Lenguaje:	English
Publicado:	Microbiology Society 2010
Materias:	Genes and Genomes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3068680/ https://www.ncbi.nlm.nih.gov/pubmed/20378655 http://dx.doi.org/10.1099/mic.0.033977-0

Ejemplares similares

Temporal Regulation of fim Genes in Uropathogenic Escherichia coli during Infection of the Murine Urinary Tract
por: Schwan, William R., et al.
Publicado: (2017)

Genomic Sequences of Uropathogenic Escherichia coli Strains with Various Fluoroquinolone Resistance Profiles
por: Okumura, Kayo, et al.
Publicado: (2020)

Complete closed genome sequences of three multidrug-resistant uropathogenic Escherichia coli
por: Guragain, Manita, et al.
Publicado: (2023)

Draft Genome Sequence of Escherichia Phage PGN829.1, Active against Highly Drug-Resistant Uropathogenic Escherichia coli
por: Chaudhary, Naveen, et al.
Publicado: (2018)

Complete Genome Sequence of Escherichia Phage 590B, Active against an Extensively Drug-Resistant Uropathogenic Escherichia coli Isolate
por: Chaudhary, Naveen, et al.
Publicado: (2021)

Draft Genome Sequence of a Canine Uropathogenic Escherichia coli Strain Isolated in New Zealand
por: Le, Vuong V. H., et al.
Publicado: (2019)

Complete Genome Sequence of Myophage Ec_Makalu_002, Which Infects Uropathogenic Escherichia coli
por: Dhungana, Gunaraj, et al.
Publicado: (2020)

Draft Whole-Genome Sequence of a Uropathogenic Escherichia coli Strain Carrying the eae Gene
por: Valiatti, Tiago Barcelos, et al.
Publicado: (2019)

Complete Genome Sequences of Seven Uropathogenic Escherichia coli Strains Isolated from Postmenopausal Women with Recurrent Urinary Tract Infection
por: Sharon, Belle M., et al.
Publicado: (2020)

Draft Genome Sequence of a Uropathogenic Escherichia coli Sequence Type 44 Strain Carrying Multiple Antimicrobial Resistance Genes
por: Ortega-Balleza, Jessica L., et al.
Publicado: (2022)

Introgression in the genus Campylobacter: generation and spread of mosaic alleles
por: Sheppard, Samuel K., et al.
Publicado: (2011)

Experimental determination of translational starts using peptide mass mapping and tandem mass spectrometry within the proteome of Mycobacterium tuberculosis
por: Rison, Stuart C. G., et al.
Publicado: (2007)

Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria
por: Pham, Thuy T., et al.
Publicado: (2007)

Quantitative RNA-seq analysis of the Campylobacter jejuni transcriptome
por: Chaudhuri, Roy R., et al.
Publicado: (2011)

Characterization of the transcriptional regulator Rv3124 of Mycobacterium tuberculosis identifies it as a positive regulator of molybdopterin biosynthesis and defines the functional consequences of a non-synonymous SNP in the Mycobacterium bovis BCG orthologue
por: Mendoza Lopez, Pablo, et al.
Publicado: (2010)

The mitochondrial genome of the pathogenic yeast Candida subhashii: GC-rich linear DNA with a protein covalently attached to the 5′ termini
por: Fricova, Dominika, et al.
Publicado: (2010)

ccrAB(Ent) serine recombinase genes are widely distributed in the Enterococcus faecium and Enterococcus casseliflavus species groups and are expressed in E. faecium
por: Bjørkeng, Eva Katrin, et al.
Publicado: (2010)

Exploring the bZIP transcription factor regulatory network in Neurospora crassa
por: Tian, Chaoguang, et al.
Publicado: (2011)

Recombination, Diversity and Allele Sharing of Infectivity Proteins Between Bartonella Species from Rodents
por: Paziewska, Anna, et al.
Publicado: (2012)

Experimental determination of translational start sites resolves uncertainties in genomic open reading frame predictions – application to Mycobacterium tuberculosis
por: Smollett, Katherine L., et al.
Publicado: (2009)

Recombination Within and Between Species of the Alpha Proteobacterium Bartonella Infecting Rodents
por: Paziewska, Anna, et al.
Publicado: (2010)

From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later
por: Barbe, Valérie, et al.
Publicado: (2009)

Molecular characterization of a novel mosaic tet(S/M) gene encoding tetracycline resistance in foodborne strains of Streptococcus bovis
por: Barile, Simona, et al.
Publicado: (2012)

Variation at the capsule locus, cps, of mistyped and non-typable Streptococcus pneumoniae isolates
por: Salter, S. J., et al.
Publicado: (2012)

A genomic approach to bacterial taxonomy: an examination and proposed reclassification of species within the genus Neisseria
por: Bennett, Julia S., et al.
Publicado: (2012)

Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain
por: Jolley, Keith A., et al.
Publicado: (2012)

Microbial Consortium Associated with the Antarctic Marine Ciliate Euplotes focardii: An Investigation from Genomic Sequences
por: Pucciarelli, Sandra, et al.
Publicado: (2015)

Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes
por: Cabal, Adriana, et al.
Publicado: (2018)

Construction and validation of a seven-gene signature for predicting overall survival in patients with kidney renal clear cell carcinoma via an integrated bioinformatics analysis
por: Jiang, Huiming, et al.
Publicado: (2020)

How to interpret and integrate multi-omics data at systems level
por: Jung, Gun Tae, et al.
Publicado: (2020)

The Diversity of Nitrogen-Cycling Microbial Genes in a Waste Stabilization Pond Reveals Changes over Space and Time that Is Uncoupled to Changing Nitrogen Chemistry
por: Rose, A., et al.
Publicado: (2020)

Risk prediction and marker selection in nonsynonymous single nucleotide polymorphisms using whole genome sequencing data
por: Lee, Young-Sup, et al.
Publicado: (2020)

Bee Trypanosomatids: First Steps in the Analysis of the Genetic Variation and Population Structure of Lotmaria passim, Crithidia bombi and Crithidia mellificae
por: Bartolomé, Carolina, et al.
Publicado: (2021)

Borrelia miyamotoi Infection in Patients from Upper Midwestern United States, 2014–2015
por: Jobe, Dean A., et al.
Publicado: (2016)

Invasion of vaginal epithelial cells by uropathogenic Escherichia coli
por: Brannon, John R., et al.
Publicado: (2020)

Aberrant Community Architecture and Attenuated Persistence of Uropathogenic Escherichia coli in the Absence of Individual IHF Subunits
por: Justice, Sheryl S., et al.
Publicado: (2012)

Uropathogenic Escherichia coli population structure and antimicrobial susceptibility in Norfolk, UK
por: Carter, Cailean, et al.
Publicado: (2023)

Sorting out the mix in microbial genomics
por: Galperin, Michael Y
Publicado: (2008)

Complete Genome Sequence of the Uropathogenic Methicillin-Resistant Staphylococcus aureus Strain MRSA-1369
por: Tükenmez, Hasan, et al.
Publicado: (2022)

The Study of Uropathogenicity Factors for Escherichia Coli Strains
por: UNGUREANU, A., et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_8p6gd26l42iep0bl6k0e1tqas1