Recent advances in the CRANK software suite for experimental phasing

For its first release in 2004, CRANK was shown to effectively detect and phase anomalous scatterers from single-wavelength anomalous diffraction data. Since then, CRANK has been significantly improved and many more structures can be built automatically with single- or multiple-wavelength anomalous d...

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Detalles Bibliográficos
Autores principales: Pannu, Navraj S., Waterreus, Willem-Jan, Skubák, Pavol, Sikharulidze, Irakli, Abrahams, Jan Pieter, de Graaff, Rudolf A. G.
Formato: Texto
Lenguaje:English
Publicado: International Union of Crystallography 2011
Materias:
Research Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3069748/
https://www.ncbi.nlm.nih.gov/pubmed/21460451
http://dx.doi.org/10.1107/S0907444910052224
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author Pannu, Navraj S.
Waterreus, Willem-Jan
Skubák, Pavol
Sikharulidze, Irakli
Abrahams, Jan Pieter
de Graaff, Rudolf A. G.
author_facet Pannu, Navraj S.
Waterreus, Willem-Jan
Skubák, Pavol
Sikharulidze, Irakli
Abrahams, Jan Pieter
de Graaff, Rudolf A. G.
author_sort Pannu, Navraj S.
collection PubMed
description For its first release in 2004, CRANK was shown to effectively detect and phase anomalous scatterers from single-wavelength anomalous diffraction data. Since then, CRANK has been significantly improved and many more structures can be built automatically with single- or multiple-wavelength anomalous diffraction or single isomorphous replacement with anomalous scattering data. Here, the new algorithms that have been developed that have led to these substantial improvements are discussed and CRANK’s performance on over 100 real data sets is shown. The latest version of CRANK is freely available for download at http://www.bfsc.leidenuniv.nl/software/crank/ and from CCP4 (http://www.ccp4.ac.uk/).
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spelling pubmed-30697482011-04-07 Recent advances in the CRANK software suite for experimental phasing Pannu, Navraj S. Waterreus, Willem-Jan Skubák, Pavol Sikharulidze, Irakli Abrahams, Jan Pieter de Graaff, Rudolf A. G. Acta Crystallogr D Biol Crystallogr Research Papers For its first release in 2004, CRANK was shown to effectively detect and phase anomalous scatterers from single-wavelength anomalous diffraction data. Since then, CRANK has been significantly improved and many more structures can be built automatically with single- or multiple-wavelength anomalous diffraction or single isomorphous replacement with anomalous scattering data. Here, the new algorithms that have been developed that have led to these substantial improvements are discussed and CRANK’s performance on over 100 real data sets is shown. The latest version of CRANK is freely available for download at http://www.bfsc.leidenuniv.nl/software/crank/ and from CCP4 (http://www.ccp4.ac.uk/). International Union of Crystallography 2011-04-01 2011-03-18 /pmc/articles/PMC3069748/ /pubmed/21460451 http://dx.doi.org/10.1107/S0907444910052224 Text en © Pannu et al. 2011 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Pannu, Navraj S.
Waterreus, Willem-Jan
Skubák, Pavol
Sikharulidze, Irakli
Abrahams, Jan Pieter
de Graaff, Rudolf A. G.
Recent advances in the CRANK software suite for experimental phasing
title Recent advances in the CRANK software suite for experimental phasing
title_full Recent advances in the CRANK software suite for experimental phasing
title_fullStr Recent advances in the CRANK software suite for experimental phasing
title_full_unstemmed Recent advances in the CRANK software suite for experimental phasing
title_short Recent advances in the CRANK software suite for experimental phasing
title_sort recent advances in the crank software suite for experimental phasing
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3069748/
https://www.ncbi.nlm.nih.gov/pubmed/21460451
http://dx.doi.org/10.1107/S0907444910052224
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