Cargando…
A new framework for identifying cis-regulatory motifs in prokaryotes
We present a new algorithm, BOBRO, for prediction of cis-regulatory motifs in a given set of promoter sequences. The algorithm substantially improves the prediction accuracy and extends the scope of applicability of the existing programs based on two key new ideas: (i) we developed a highly effectiv...
Autores principales: | Li, Guojun, Liu, Bingqiang, Ma, Qin, Xu, Ying |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3074163/ https://www.ncbi.nlm.nih.gov/pubmed/21149261 http://dx.doi.org/10.1093/nar/gkq948 |
Ejemplares similares
-
Accurate recognition of cis-regulatory motifs with the correct lengths in prokaryotic genomes
por: Li, Guojun, et al.
Publicado: (2010) -
An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes
por: Liu, Bingqiang, et al.
Publicado: (2016) -
Genome-wide de novo prediction of cis-regulatory binding sites in prokaryotes
por: Zhang, Shaoqiang, et al.
Publicado: (2009) -
Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships
por: Yokoyama, Ken Daigoro, et al.
Publicado: (2009) -
i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules
por: Herrmann, Carl, et al.
Publicado: (2012)