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MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution
Panbiogeography represents an evolutionary approach to biogeography, using rational cost-efficient methods to reduce initial complexity to locality data, and depict general distribution patterns. However, few quantitative, and automated panbiogeographic methods exist. In this study, we propose a new...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3075252/ https://www.ncbi.nlm.nih.gov/pubmed/21533259 http://dx.doi.org/10.1371/journal.pone.0018460 |
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author | Echeverría-Londoño, Susy Miranda-Esquivel, Daniel Rafael |
author_facet | Echeverría-Londoño, Susy Miranda-Esquivel, Daniel Rafael |
author_sort | Echeverría-Londoño, Susy |
collection | PubMed |
description | Panbiogeography represents an evolutionary approach to biogeography, using rational cost-efficient methods to reduce initial complexity to locality data, and depict general distribution patterns. However, few quantitative, and automated panbiogeographic methods exist. In this study, we propose a new algorithm, within a quantitative, geometrical framework, to perform panbiogeographical analyses as an alternative to more traditional methods. The algorithm first calculates a minimum spanning tree, an individual track for each species in a panbiogeographic context. Then the spatial congruence among segments of the minimum spanning trees is calculated using five congruence parameters, producing a general distribution pattern. In addition, the algorithm removes the ambiguity, and subjectivity often present in a manual panbiogeographic analysis. Results from two empirical examples using 61 species of the genus Bomarea (2340 records), and 1031 genera of both plants and animals (100118 records) distributed across the Northern Andes, demonstrated that a geometrical approach to panbiogeography is a feasible quantitative method to determine general distribution patterns for taxa, reducing complexity, and the time needed for managing large data sets. |
format | Text |
id | pubmed-3075252 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-30752522011-04-29 MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution Echeverría-Londoño, Susy Miranda-Esquivel, Daniel Rafael PLoS One Research Article Panbiogeography represents an evolutionary approach to biogeography, using rational cost-efficient methods to reduce initial complexity to locality data, and depict general distribution patterns. However, few quantitative, and automated panbiogeographic methods exist. In this study, we propose a new algorithm, within a quantitative, geometrical framework, to perform panbiogeographical analyses as an alternative to more traditional methods. The algorithm first calculates a minimum spanning tree, an individual track for each species in a panbiogeographic context. Then the spatial congruence among segments of the minimum spanning trees is calculated using five congruence parameters, producing a general distribution pattern. In addition, the algorithm removes the ambiguity, and subjectivity often present in a manual panbiogeographic analysis. Results from two empirical examples using 61 species of the genus Bomarea (2340 records), and 1031 genera of both plants and animals (100118 records) distributed across the Northern Andes, demonstrated that a geometrical approach to panbiogeography is a feasible quantitative method to determine general distribution patterns for taxa, reducing complexity, and the time needed for managing large data sets. Public Library of Science 2011-04-12 /pmc/articles/PMC3075252/ /pubmed/21533259 http://dx.doi.org/10.1371/journal.pone.0018460 Text en Echeverría-Londoño, Miranda-Esquivel. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Echeverría-Londoño, Susy Miranda-Esquivel, Daniel Rafael MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution |
title | MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution |
title_full | MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution |
title_fullStr | MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution |
title_full_unstemmed | MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution |
title_short | MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution |
title_sort | martitracks: a geometrical approach for identifying geographical patterns of distribution |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3075252/ https://www.ncbi.nlm.nih.gov/pubmed/21533259 http://dx.doi.org/10.1371/journal.pone.0018460 |
work_keys_str_mv | AT echeverrialondonosusy martitracksageometricalapproachforidentifyinggeographicalpatternsofdistribution AT mirandaesquiveldanielrafael martitracksageometricalapproachforidentifyinggeographicalpatternsofdistribution |