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Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci

Soluble ICAM-1 (sICAM-1) is an endothelium-derived inflammatory marker that has been associated with diverse conditions such as myocardial infarction, diabetes, stroke, and malaria. Despite evidence for a heritable component to sICAM-1 levels, few genetic loci have been identified so far. To compreh...

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Autores principales: Paré, Guillaume, Ridker, Paul M., Rose, Lynda, Barbalic, Maja, Dupuis, Josée, Dehghan, Abbas, Bis, Joshua C., Benjamin, Emelia J., Shiffman, Dov, Parker, Alexander N., Chasman, Daniel I.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3080865/
https://www.ncbi.nlm.nih.gov/pubmed/21533024
http://dx.doi.org/10.1371/journal.pgen.1001374
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author Paré, Guillaume
Ridker, Paul M.
Rose, Lynda
Barbalic, Maja
Dupuis, Josée
Dehghan, Abbas
Bis, Joshua C.
Benjamin, Emelia J.
Shiffman, Dov
Parker, Alexander N.
Chasman, Daniel I.
author_facet Paré, Guillaume
Ridker, Paul M.
Rose, Lynda
Barbalic, Maja
Dupuis, Josée
Dehghan, Abbas
Bis, Joshua C.
Benjamin, Emelia J.
Shiffman, Dov
Parker, Alexander N.
Chasman, Daniel I.
author_sort Paré, Guillaume
collection PubMed
description Soluble ICAM-1 (sICAM-1) is an endothelium-derived inflammatory marker that has been associated with diverse conditions such as myocardial infarction, diabetes, stroke, and malaria. Despite evidence for a heritable component to sICAM-1 levels, few genetic loci have been identified so far. To comprehensively address this issue, we performed a genome-wide association analysis of sICAM-1 concentration in 22,435 apparently healthy women from the Women's Genome Health Study. While our results confirm the previously reported associations at the ABO and ICAM1 loci, four novel associations were identified in the vicinity of NFKBIK (rs3136642, P = 5.4×10(−9)), PNPLA3 (rs738409, P = 5.8×10(−9)), RELA (rs1049728, P = 2.7×10(−16)), and SH2B3 (rs3184504, P = 2.9×10(−17)). Two loci, NFKBIB and RELA, are involved in NFKB signaling pathway; PNPLA3 is known for its association with fatty liver disease; and SH3B2 has been associated with a multitude of traits and disease including myocardial infarction. These associations provide insights into the genetic regulation of sICAM-1 levels and implicate these loci in the regulation of endothelial function.
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spelling pubmed-30808652011-04-29 Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci Paré, Guillaume Ridker, Paul M. Rose, Lynda Barbalic, Maja Dupuis, Josée Dehghan, Abbas Bis, Joshua C. Benjamin, Emelia J. Shiffman, Dov Parker, Alexander N. Chasman, Daniel I. PLoS Genet Research Article Soluble ICAM-1 (sICAM-1) is an endothelium-derived inflammatory marker that has been associated with diverse conditions such as myocardial infarction, diabetes, stroke, and malaria. Despite evidence for a heritable component to sICAM-1 levels, few genetic loci have been identified so far. To comprehensively address this issue, we performed a genome-wide association analysis of sICAM-1 concentration in 22,435 apparently healthy women from the Women's Genome Health Study. While our results confirm the previously reported associations at the ABO and ICAM1 loci, four novel associations were identified in the vicinity of NFKBIK (rs3136642, P = 5.4×10(−9)), PNPLA3 (rs738409, P = 5.8×10(−9)), RELA (rs1049728, P = 2.7×10(−16)), and SH2B3 (rs3184504, P = 2.9×10(−17)). Two loci, NFKBIB and RELA, are involved in NFKB signaling pathway; PNPLA3 is known for its association with fatty liver disease; and SH3B2 has been associated with a multitude of traits and disease including myocardial infarction. These associations provide insights into the genetic regulation of sICAM-1 levels and implicate these loci in the regulation of endothelial function. Public Library of Science 2011-04-21 /pmc/articles/PMC3080865/ /pubmed/21533024 http://dx.doi.org/10.1371/journal.pgen.1001374 Text en Paré et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Paré, Guillaume
Ridker, Paul M.
Rose, Lynda
Barbalic, Maja
Dupuis, Josée
Dehghan, Abbas
Bis, Joshua C.
Benjamin, Emelia J.
Shiffman, Dov
Parker, Alexander N.
Chasman, Daniel I.
Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci
title Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci
title_full Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci
title_fullStr Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci
title_full_unstemmed Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci
title_short Genome-Wide Association Analysis of Soluble ICAM-1 Concentration Reveals Novel Associations at the NFKBIK, PNPLA3, RELA, and SH2B3 Loci
title_sort genome-wide association analysis of soluble icam-1 concentration reveals novel associations at the nfkbik, pnpla3, rela, and sh2b3 loci
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3080865/
https://www.ncbi.nlm.nih.gov/pubmed/21533024
http://dx.doi.org/10.1371/journal.pgen.1001374
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