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Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments

The environments in which organisms live and reproduce are rarely static, and as the environment changes, populations must evolve so that phenotypes match the challenges presented. The quantitative traits that map to environmental variables are underlain by hundreds or thousands of interacting genes...

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Detalles Bibliográficos
Autor principal: Malcom, Jacob W.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3081814/
https://www.ncbi.nlm.nih.gov/pubmed/21541020
http://dx.doi.org/10.1371/journal.pone.0014747
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author Malcom, Jacob W.
author_facet Malcom, Jacob W.
author_sort Malcom, Jacob W.
collection PubMed
description The environments in which organisms live and reproduce are rarely static, and as the environment changes, populations must evolve so that phenotypes match the challenges presented. The quantitative traits that map to environmental variables are underlain by hundreds or thousands of interacting genes whose allele frequencies and epistatic relationships must change appropriately for adaptation to occur. Extending an earlier model in which individuals possess an ecologically-critical trait encoded by gene networks of 16 to 256 genes and random or scale-free topology, I test the hypothesis that smaller, scale-free networks permit longer persistence times in a constantly-changing environment. Genetic architecture interacting with the rate of environmental change accounts for 78% of the variance in trait heritability and 66% of the variance in population persistence times. When the rate of environmental change is high, the relationship between network size and heritability is apparent, with smaller and scale-free networks conferring a distinct advantage for persistence time. However, when the rate of environmental change is very slow, the relationship between network size and heritability disappears and populations persist the duration of the simulations, without regard to genetic architecture. These results provide a link between genes and population dynamics that may be tested as the -omics and bioinformatics fields mature, and as we are able to determine the genetic basis of ecologically-relevant quantitative traits.
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spelling pubmed-30818142011-05-03 Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments Malcom, Jacob W. PLoS One Research Article The environments in which organisms live and reproduce are rarely static, and as the environment changes, populations must evolve so that phenotypes match the challenges presented. The quantitative traits that map to environmental variables are underlain by hundreds or thousands of interacting genes whose allele frequencies and epistatic relationships must change appropriately for adaptation to occur. Extending an earlier model in which individuals possess an ecologically-critical trait encoded by gene networks of 16 to 256 genes and random or scale-free topology, I test the hypothesis that smaller, scale-free networks permit longer persistence times in a constantly-changing environment. Genetic architecture interacting with the rate of environmental change accounts for 78% of the variance in trait heritability and 66% of the variance in population persistence times. When the rate of environmental change is high, the relationship between network size and heritability is apparent, with smaller and scale-free networks conferring a distinct advantage for persistence time. However, when the rate of environmental change is very slow, the relationship between network size and heritability disappears and populations persist the duration of the simulations, without regard to genetic architecture. These results provide a link between genes and population dynamics that may be tested as the -omics and bioinformatics fields mature, and as we are able to determine the genetic basis of ecologically-relevant quantitative traits. Public Library of Science 2011-04-25 /pmc/articles/PMC3081814/ /pubmed/21541020 http://dx.doi.org/10.1371/journal.pone.0014747 Text en Jacob W. Malcom. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Malcom, Jacob W.
Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments
title Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments
title_full Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments
title_fullStr Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments
title_full_unstemmed Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments
title_short Smaller Gene Networks Permit Longer Persistence in Fast-Changing Environments
title_sort smaller gene networks permit longer persistence in fast-changing environments
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3081814/
https://www.ncbi.nlm.nih.gov/pubmed/21541020
http://dx.doi.org/10.1371/journal.pone.0014747
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