Cargando…

Different sequence signatures in the upstream regions of plant and animal tRNA genes shape distinct modes of regulation

In eukaryotes, the transcription of tRNA genes is initiated by the concerted action of transcription factors IIIC (TFIIIC) and IIIB (TFIIIB) which direct the recruitment of polymerase III. While TFIIIC recognizes highly conserved, intragenic promoter elements, TFIIIB binds to the non-coding 5′-upstr...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Gong, Lukoszek, Radoslaw, Mueller-Roeber, Bernd, Ignatova, Zoya
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2011
Materias:	RNA
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3082873/ https://www.ncbi.nlm.nih.gov/pubmed/21138970 http://dx.doi.org/10.1093/nar/gkq1257

Ejemplares similares

Insights into the adaptive response of Arabidopsis thaliana to prolonged thermal stress by ribosomal profiling and RNA-Seq
por: Lukoszek, Radoslaw, et al.
Publicado: (2016)

Plant mitochondria use two pathways for the biogenesis of tRNA(His)
por: Placido, Antonio, et al.
Publicado: (2010)

Distinct tRNA recognition strategies used by a homologous family of editing domains prevent mistranslation
por: Das, Mom, et al.
Publicado: (2014)

PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters
por: Preker, Pascal, et al.
Publicado: (2011)

Recognition of pyrrolysine tRNA by the Desulfitobacterium hafniense pyrrolysyl-tRNA synthetase
por: Herring, Stephanie, et al.
Publicado: (2007)

CMTR1 is recruited to transcription start sites and promotes ribosomal protein and histone gene expression in embryonic stem cells
por: Liang, Shang, et al.
Publicado: (2022)

In vivo modification of tRNA with an artificial nucleobase leads to full disease remission in an animal model of multiple sclerosis
por: Varghese, Sreeja, et al.
Publicado: (2017)

Recognition of tRNA(Gln) by Helicobacter pylori GluRS2—a tRNA(Gln)-specific glutamyl-tRNA synthetase
por: Chang, Keng-Ming, et al.
Publicado: (2009)

tRNA(Sec) is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans
por: Aeby, Eric, et al.
Publicado: (2010)

Evolution of acceptor stem tRNA recognition by class II prolyl-tRNA synthetase
por: An, Songon, et al.
Publicado: (2008)

A single tRNA base pair mediates bacterial tRNA-dependent biosynthesis of asparagine
por: Bailly, Marc, et al.
Publicado: (2006)

In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership
por: Jakó, Éena, et al.
Publicado: (2007)

Characterization of a nucleocapsid-like region and of two distinct primer tRNA(Lys,2) binding sites in the endogenous retrovirus Gypsy
por: Gabus, Caroline, et al.
Publicado: (2006)

Recognition of tRNA(Leu) by Aquifex aeolicus leucyl-tRNA synthetase during the aminoacylation and editing steps
por: Yao, Peng, et al.
Publicado: (2008)

Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs
por: Szarzynska, Bogna, et al.
Publicado: (2009)

A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii
por: Grewe, Felix, et al.
Publicado: (2009)

Eukaryotic tRNA sequences present conserved and amino acid-specific structural signatures
por: Westhof, Eric, et al.
Publicado: (2022)

Upstream of N-Ras C-terminal cold shock domains mediate poly(A) specificity in a novel RNA recognition mode and bind poly(A) binding protein
por: Hollmann, Nele Merret, et al.
Publicado: (2023)

An unusual tRNA(Thr) derived from tRNA(His) reassigns in yeast mitochondria the CUN codons to threonine
por: Su, Dan, et al.
Publicado: (2011)

Auxiliary tRNAs: large-scale analysis of tRNA genes reveals patterns of tRNA repertoire dynamics
por: Wald, Naama, et al.
Publicado: (2014)

Translational stalling at polyproline stretches is modulated by the sequence context upstream of the stall site
por: Starosta, Agata L., et al.
Publicado: (2014)

Misacylation of tRNA with methionine in Saccharomyces cerevisiae
por: Wiltrout, Elizabeth, et al.
Publicado: (2012)

tRNA 5′-end repair activities of tRNA(His) guanylyltransferase (Thg1)-like proteins from Bacteria and Archaea
por: Rao, Bhalchandra S., et al.
Publicado: (2011)

Structural characterization of cationic lipid–tRNA complexes
por: Marty, Regis, et al.
Publicado: (2009)

Processing by RNase 1 forms tRNA halves and distinct Y RNA fragments in the extracellular environment
por: Nechooshtan, Gal, et al.
Publicado: (2020)

In vivo identification of essential nucleotides in tRNA(Leu) to its functions by using a constructed yeast tRNA(Leu) knockout strain
por: Huang, Qian, et al.
Publicado: (2012)

Life without tRNA(Ile)-lysidine synthetase: translation of the isoleucine codon AUA in Bacillus subtilis lacking the canonical tRNA(2)(Ile)
por: Köhrer, Caroline, et al.
Publicado: (2014)

Core flexibility of a truncated metazoan mitochondrial tRNA
por: Frazer-Abel, Ashley A., et al.
Publicado: (2008)

Optimization and characterization of tRNA-shRNA expression constructs
por: Scherer, Lisa J., et al.
Publicado: (2007)

Formation of the conserved pseudouridine at position 55 in archaeal tRNA
por: Roovers, Martine, et al.
Publicado: (2006)

Contribution of ribosomal residues to P-site tRNA binding
por: Shoji, Shinichiro, et al.
Publicado: (2009)

Low modularity of aminoacyl-tRNA substrates in polymerization by the ribosome
por: Forster, Anthony C.
Publicado: (2009)

tRNA over-expression in breast cancer and functional consequences
por: Pavon-Eternod, Mariana, et al.
Publicado: (2009)

Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
por: Susorov, Denis, et al.
Publicado: (2015)

Mitochondrial poly(A) polymerase is involved in tRNA repair
por: Fiedler, Mario, et al.
Publicado: (2015)

Conserved amino acids in each subunit of the heteroligomeric tRNA m(1)A58 Mtase from Saccharomyces cerevisiae contribute to tRNA binding
por: Ozanick, Sarah G., et al.
Publicado: (2007)

A deafness-associated tRNA(Asp) mutation alters the m(1)G37 modification, aminoacylation and stability of tRNA(Asp) and mitochondrial function
por: Wang, Meng, et al.
Publicado: (2016)

A deafness-associated tRNA(His) mutation alters the mitochondrial function, ROS production and membrane potential
por: Gong, Shasha, et al.
Publicado: (2014)

Evolution of eukaryal tRNA-guanine transglycosylase: insight gained from the heterocyclic substrate recognition by the wild-type and mutant human and Escherichia coli tRNA-guanine transglycosylases
por: Chen, Yi-Chen, et al.
Publicado: (2011)

Domain collapse and active site ablation generate a widespread animal mitochondrial seryl-tRNA synthetase
por: de Potter, Bastiaan, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_j2e46klt78a8fc47g285hgiub5