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What does validation of cases in electronic record databases mean? The potential contribution of free text†
Electronic health records are increasingly used for research. The definition of cases or endpoints often relies on the use of coded diagnostic data, using a pre-selected group of codes. Validation of these cases, as ‘true’ cases of the disease, is crucial. There are, however, ambiguities in what is...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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John Wiley & Sons, Ltd.
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3083518/ https://www.ncbi.nlm.nih.gov/pubmed/21351316 http://dx.doi.org/10.1002/pds.2086 |
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author | Nicholson, Amanda Tate, Anne Rosemary Koeling, Rob Cassell, Jackie A |
author_facet | Nicholson, Amanda Tate, Anne Rosemary Koeling, Rob Cassell, Jackie A |
author_sort | Nicholson, Amanda |
collection | PubMed |
description | Electronic health records are increasingly used for research. The definition of cases or endpoints often relies on the use of coded diagnostic data, using a pre-selected group of codes. Validation of these cases, as ‘true’ cases of the disease, is crucial. There are, however, ambiguities in what is meant by validation in the context of electronic records. Validation usually implies comparison of a definition against a gold standard of diagnosis and the ability to identify false negatives (‘true’ cases which were not detected) as well as false positives (detected cases which did not have the condition). We argue that two separate concepts of validation are often conflated in existing studies. Firstly, whether the GP thought the patient was suffering from a particular condition (which we term confirmation or internal validation) and secondly, whether the patient really had the condition (external validation). Few studies have the ability to detect false negatives who have not received a diagnostic code. Natural language processing is likely to open up the use of free text within the electronic record which will facilitate both the validation of the coded diagnosis and searching for false negatives. Copyright © 2011 John Wiley & Sons, Ltd. |
format | Text |
id | pubmed-3083518 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | John Wiley & Sons, Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-30835182011-05-05 What does validation of cases in electronic record databases mean? The potential contribution of free text† Nicholson, Amanda Tate, Anne Rosemary Koeling, Rob Cassell, Jackie A Pharmacoepidemiol Drug Saf Commentary Electronic health records are increasingly used for research. The definition of cases or endpoints often relies on the use of coded diagnostic data, using a pre-selected group of codes. Validation of these cases, as ‘true’ cases of the disease, is crucial. There are, however, ambiguities in what is meant by validation in the context of electronic records. Validation usually implies comparison of a definition against a gold standard of diagnosis and the ability to identify false negatives (‘true’ cases which were not detected) as well as false positives (detected cases which did not have the condition). We argue that two separate concepts of validation are often conflated in existing studies. Firstly, whether the GP thought the patient was suffering from a particular condition (which we term confirmation or internal validation) and secondly, whether the patient really had the condition (external validation). Few studies have the ability to detect false negatives who have not received a diagnostic code. Natural language processing is likely to open up the use of free text within the electronic record which will facilitate both the validation of the coded diagnosis and searching for false negatives. Copyright © 2011 John Wiley & Sons, Ltd. John Wiley & Sons, Ltd. 2011-03 2011-01-18 /pmc/articles/PMC3083518/ /pubmed/21351316 http://dx.doi.org/10.1002/pds.2086 Text en Copyright © 2011 John Wiley & Sons, Ltd. http://creativecommons.org/licenses/by/2.5/ Re-use of this article is permitted in accordance with the Creative Commons Deed, Attribution 2.5, which does not permit commercial exploitation. |
spellingShingle | Commentary Nicholson, Amanda Tate, Anne Rosemary Koeling, Rob Cassell, Jackie A What does validation of cases in electronic record databases mean? The potential contribution of free text† |
title | What does validation of cases in electronic record databases mean? The potential contribution of free text† |
title_full | What does validation of cases in electronic record databases mean? The potential contribution of free text† |
title_fullStr | What does validation of cases in electronic record databases mean? The potential contribution of free text† |
title_full_unstemmed | What does validation of cases in electronic record databases mean? The potential contribution of free text† |
title_short | What does validation of cases in electronic record databases mean? The potential contribution of free text† |
title_sort | what does validation of cases in electronic record databases mean? the potential contribution of free text† |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3083518/ https://www.ncbi.nlm.nih.gov/pubmed/21351316 http://dx.doi.org/10.1002/pds.2086 |
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