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Microsatellite characterization of Cimarron Uruguayo dogs

Various genetic markers, including microsatellites, have been used to analyze the genetic polymorphism and heterozygosity in canine breeds. In this work, we used nine microsatellite markers to investigate the genetic variability in Cimarron Uruguayo dogs, the only officially recognized native canine...

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Autores principales: Gagliardi, Rosa, Llambí, Silvia, García, Cristina, Arruga, María Victoria
Formato: Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3085364/
https://www.ncbi.nlm.nih.gov/pubmed/21637561
http://dx.doi.org/10.1590/S1415-47572010005000101
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author Gagliardi, Rosa
Llambí, Silvia
García, Cristina
Arruga, María Victoria
author_facet Gagliardi, Rosa
Llambí, Silvia
García, Cristina
Arruga, María Victoria
author_sort Gagliardi, Rosa
collection PubMed
description Various genetic markers, including microsatellites, have been used to analyze the genetic polymorphism and heterozygosity in canine breeds. In this work, we used nine microsatellite markers to investigate the genetic variability in Cimarron Uruguayo dogs, the only officially recognized native canine breed in Uruguay. DNA from 30 Cimarron Uruguayo dogs from northeastern and southern Uruguay was analyzed. The allelic frequencies for each microsatellite, the genetic variability and the consanguinity were calculated, as were the polymorphic information content (PIC) and the probability of exclusion (PE). All of the microsatellites studied were polymorphic. FH 2361, FH 2305 and PEZ 03 were the most informative, with PIC values > 0.7, in agreement with results for other canine breeds. The PE values for the markers were within the ranges previously described and were generally greater for microsatellites with higher PIC values. The heterozygosity value (0.649) was considered high since only nine microsatellites were analyzed. Compared with data for other breeds, the results obtained here indicate that Cimarron Uruguayo dogs have high genetic diversity.
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spelling pubmed-30853642011-06-02 Microsatellite characterization of Cimarron Uruguayo dogs Gagliardi, Rosa Llambí, Silvia García, Cristina Arruga, María Victoria Genet Mol Biol Evolutionary Genetics Various genetic markers, including microsatellites, have been used to analyze the genetic polymorphism and heterozygosity in canine breeds. In this work, we used nine microsatellite markers to investigate the genetic variability in Cimarron Uruguayo dogs, the only officially recognized native canine breed in Uruguay. DNA from 30 Cimarron Uruguayo dogs from northeastern and southern Uruguay was analyzed. The allelic frequencies for each microsatellite, the genetic variability and the consanguinity were calculated, as were the polymorphic information content (PIC) and the probability of exclusion (PE). All of the microsatellites studied were polymorphic. FH 2361, FH 2305 and PEZ 03 were the most informative, with PIC values > 0.7, in agreement with results for other canine breeds. The PE values for the markers were within the ranges previously described and were generally greater for microsatellites with higher PIC values. The heterozygosity value (0.649) was considered high since only nine microsatellites were analyzed. Compared with data for other breeds, the results obtained here indicate that Cimarron Uruguayo dogs have high genetic diversity. Sociedade Brasileira de Genética 2011 2011-03-01 /pmc/articles/PMC3085364/ /pubmed/21637561 http://dx.doi.org/10.1590/S1415-47572010005000101 Text en Copyright © 2011, Sociedade Brasileira de Genética. License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Evolutionary Genetics
Gagliardi, Rosa
Llambí, Silvia
García, Cristina
Arruga, María Victoria
Microsatellite characterization of Cimarron Uruguayo dogs
title Microsatellite characterization of Cimarron Uruguayo dogs
title_full Microsatellite characterization of Cimarron Uruguayo dogs
title_fullStr Microsatellite characterization of Cimarron Uruguayo dogs
title_full_unstemmed Microsatellite characterization of Cimarron Uruguayo dogs
title_short Microsatellite characterization of Cimarron Uruguayo dogs
title_sort microsatellite characterization of cimarron uruguayo dogs
topic Evolutionary Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3085364/
https://www.ncbi.nlm.nih.gov/pubmed/21637561
http://dx.doi.org/10.1590/S1415-47572010005000101
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