Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps

Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform an...

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Detalles Bibliográficos
Autores principales: Perez-Llamas, Christian, Lopez-Bigas, Nuria
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3094337/
https://www.ncbi.nlm.nih.gov/pubmed/21602921
http://dx.doi.org/10.1371/journal.pone.0019541
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author Perez-Llamas, Christian
Lopez-Bigas, Nuria
author_facet Perez-Llamas, Christian
Lopez-Bigas, Nuria
author_sort Perez-Llamas, Christian
collection PubMed
description Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform analyses and visualize data and results as interactive heat-maps. Gitools contains data import systems from several sources (i.e. IntOGen, Biomart, KEGG, Gene Ontology), which facilitate the integration of novel data with previous knowledge.
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spelling pubmed-30943372011-05-19 Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps Perez-Llamas, Christian Lopez-Bigas, Nuria PLoS One Research Article Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform analyses and visualize data and results as interactive heat-maps. Gitools contains data import systems from several sources (i.e. IntOGen, Biomart, KEGG, Gene Ontology), which facilitate the integration of novel data with previous knowledge. Public Library of Science 2011-05-13 /pmc/articles/PMC3094337/ /pubmed/21602921 http://dx.doi.org/10.1371/journal.pone.0019541 Text en Perez-Llamas, Lopez-Bigas. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Perez-Llamas, Christian
Lopez-Bigas, Nuria
Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
title Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
title_full Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
title_fullStr Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
title_full_unstemmed Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
title_short Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps
title_sort gitools: analysis and visualisation of genomic data using interactive heat-maps
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3094337/
https://www.ncbi.nlm.nih.gov/pubmed/21602921
http://dx.doi.org/10.1371/journal.pone.0019541
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