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High diversity of root associated fungi in both alpine and arctic Dryas octopetala
BACKGROUND: Dryas octopetala is a widespread dwarf shrub in alpine and arctic regions that forms ectomycorrhizal (ECM) symbiotic relationships with fungi. In this study we investigated the fungal communities associated with roots of D. octopetala in alpine sites in Norway and in the High Arctic on S...
Autores principales: | , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3095326/ https://www.ncbi.nlm.nih.gov/pubmed/21070665 http://dx.doi.org/10.1186/1471-2229-10-244 |
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author | Bjorbækmo, Marit Frederikke Markussen Carlsen, Tor Brysting, Anne Vrålstad, Trude Høiland, Klaus Ugland, Karl Inne Geml, Jozsef Schumacher, Trond Kauserud, Håvard |
author_facet | Bjorbækmo, Marit Frederikke Markussen Carlsen, Tor Brysting, Anne Vrålstad, Trude Høiland, Klaus Ugland, Karl Inne Geml, Jozsef Schumacher, Trond Kauserud, Håvard |
author_sort | Bjorbækmo, Marit Frederikke Markussen |
collection | PubMed |
description | BACKGROUND: Dryas octopetala is a widespread dwarf shrub in alpine and arctic regions that forms ectomycorrhizal (ECM) symbiotic relationships with fungi. In this study we investigated the fungal communities associated with roots of D. octopetala in alpine sites in Norway and in the High Arctic on Svalbard, where we aimed to reveal whether the fungal diversity and species composition varied across the Alpine and Arctic regions. The internal transcribed spacer (ITS) region of nuclear ribosomal DNA was used to identify the fungal communities from bulk root samples obtained from 24 plants. RESULTS: A total of 137 operational taxonomic units (OTUs) were detected (using 97% similarity cut off during sequence clustering) and well-known ECM genera such as Cenococcum, Cortinarius, Hebeloma, Inocybe and Tomentella occurred frequently. There was no decrease in fungal diversity with increasing latitude. The overall spatial heterogeneity was high, but a weak geographical structuring of the composition of OTUs in the root systems was observed. Calculated species accumulation curves did not level off. CONCLUSIONS: This study indicates that the diversity of fungi associated with D. octopetala does not decrease in high latitude arctic regions, which contrasts observations made in a wide spectrum of other organism groups. A high degree of patchiness was observed across root systems, but the fungal communities were nevertheless weakly spatially structured. Non-asymptotical species accumulation curves and the occurrence of a high number of singletons indicated that only a small fraction of the fungal diversity was detected. |
format | Text |
id | pubmed-3095326 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-30953262011-05-17 High diversity of root associated fungi in both alpine and arctic Dryas octopetala Bjorbækmo, Marit Frederikke Markussen Carlsen, Tor Brysting, Anne Vrålstad, Trude Høiland, Klaus Ugland, Karl Inne Geml, Jozsef Schumacher, Trond Kauserud, Håvard BMC Plant Biol Research Article BACKGROUND: Dryas octopetala is a widespread dwarf shrub in alpine and arctic regions that forms ectomycorrhizal (ECM) symbiotic relationships with fungi. In this study we investigated the fungal communities associated with roots of D. octopetala in alpine sites in Norway and in the High Arctic on Svalbard, where we aimed to reveal whether the fungal diversity and species composition varied across the Alpine and Arctic regions. The internal transcribed spacer (ITS) region of nuclear ribosomal DNA was used to identify the fungal communities from bulk root samples obtained from 24 plants. RESULTS: A total of 137 operational taxonomic units (OTUs) were detected (using 97% similarity cut off during sequence clustering) and well-known ECM genera such as Cenococcum, Cortinarius, Hebeloma, Inocybe and Tomentella occurred frequently. There was no decrease in fungal diversity with increasing latitude. The overall spatial heterogeneity was high, but a weak geographical structuring of the composition of OTUs in the root systems was observed. Calculated species accumulation curves did not level off. CONCLUSIONS: This study indicates that the diversity of fungi associated with D. octopetala does not decrease in high latitude arctic regions, which contrasts observations made in a wide spectrum of other organism groups. A high degree of patchiness was observed across root systems, but the fungal communities were nevertheless weakly spatially structured. Non-asymptotical species accumulation curves and the occurrence of a high number of singletons indicated that only a small fraction of the fungal diversity was detected. BioMed Central 2010-11-11 /pmc/articles/PMC3095326/ /pubmed/21070665 http://dx.doi.org/10.1186/1471-2229-10-244 Text en Copyright ©2010 Bjorbækmo et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Bjorbækmo, Marit Frederikke Markussen Carlsen, Tor Brysting, Anne Vrålstad, Trude Høiland, Klaus Ugland, Karl Inne Geml, Jozsef Schumacher, Trond Kauserud, Håvard High diversity of root associated fungi in both alpine and arctic Dryas octopetala |
title | High diversity of root associated fungi in both alpine and arctic Dryas octopetala |
title_full | High diversity of root associated fungi in both alpine and arctic Dryas octopetala |
title_fullStr | High diversity of root associated fungi in both alpine and arctic Dryas octopetala |
title_full_unstemmed | High diversity of root associated fungi in both alpine and arctic Dryas octopetala |
title_short | High diversity of root associated fungi in both alpine and arctic Dryas octopetala |
title_sort | high diversity of root associated fungi in both alpine and arctic dryas octopetala |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3095326/ https://www.ncbi.nlm.nih.gov/pubmed/21070665 http://dx.doi.org/10.1186/1471-2229-10-244 |
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