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Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
The modular organization of networks of individual neurons interwoven through synapses has not been fully explored due to the incredible complexity of the connectivity architecture. Here we use the modularity-based community detection method for directed, weighted networks to examine hierarchically...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098222/ https://www.ncbi.nlm.nih.gov/pubmed/21625578 http://dx.doi.org/10.1371/journal.pcbi.1001139 |
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author | Sohn, Yunkyu Choi, Myung-Kyu Ahn, Yong-Yeol Lee, Junho Jeong, Jaeseung |
author_facet | Sohn, Yunkyu Choi, Myung-Kyu Ahn, Yong-Yeol Lee, Junho Jeong, Jaeseung |
author_sort | Sohn, Yunkyu |
collection | PubMed |
description | The modular organization of networks of individual neurons interwoven through synapses has not been fully explored due to the incredible complexity of the connectivity architecture. Here we use the modularity-based community detection method for directed, weighted networks to examine hierarchically organized modules in the complete wiring diagram (connectome) of Caenorhabditis elegans (C. elegans) and to investigate their topological properties. Incorporating bilateral symmetry of the network as an important cue for proper cluster assignment, we identified anatomical clusters in the C. elegans connectome, including a body-spanning cluster, which correspond to experimentally identified functional circuits. Moreover, the hierarchical organization of the five clusters explains the systemic cooperation (e.g., mechanosensation, chemosensation, and navigation) that occurs among the structurally segregated biological circuits to produce higher-order complex behaviors. |
format | Text |
id | pubmed-3098222 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-30982222011-05-27 Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome Sohn, Yunkyu Choi, Myung-Kyu Ahn, Yong-Yeol Lee, Junho Jeong, Jaeseung PLoS Comput Biol Research Article The modular organization of networks of individual neurons interwoven through synapses has not been fully explored due to the incredible complexity of the connectivity architecture. Here we use the modularity-based community detection method for directed, weighted networks to examine hierarchically organized modules in the complete wiring diagram (connectome) of Caenorhabditis elegans (C. elegans) and to investigate their topological properties. Incorporating bilateral symmetry of the network as an important cue for proper cluster assignment, we identified anatomical clusters in the C. elegans connectome, including a body-spanning cluster, which correspond to experimentally identified functional circuits. Moreover, the hierarchical organization of the five clusters explains the systemic cooperation (e.g., mechanosensation, chemosensation, and navigation) that occurs among the structurally segregated biological circuits to produce higher-order complex behaviors. Public Library of Science 2011-05-19 /pmc/articles/PMC3098222/ /pubmed/21625578 http://dx.doi.org/10.1371/journal.pcbi.1001139 Text en Sohn et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Sohn, Yunkyu Choi, Myung-Kyu Ahn, Yong-Yeol Lee, Junho Jeong, Jaeseung Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome |
title | Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome |
title_full | Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome |
title_fullStr | Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome |
title_full_unstemmed | Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome |
title_short | Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome |
title_sort | topological cluster analysis reveals the systemic organization of the caenorhabditis elegans connectome |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098222/ https://www.ncbi.nlm.nih.gov/pubmed/21625578 http://dx.doi.org/10.1371/journal.pcbi.1001139 |
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