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Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome

The modular organization of networks of individual neurons interwoven through synapses has not been fully explored due to the incredible complexity of the connectivity architecture. Here we use the modularity-based community detection method for directed, weighted networks to examine hierarchically...

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Detalles Bibliográficos
Autores principales: Sohn, Yunkyu, Choi, Myung-Kyu, Ahn, Yong-Yeol, Lee, Junho, Jeong, Jaeseung
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098222/
https://www.ncbi.nlm.nih.gov/pubmed/21625578
http://dx.doi.org/10.1371/journal.pcbi.1001139
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author Sohn, Yunkyu
Choi, Myung-Kyu
Ahn, Yong-Yeol
Lee, Junho
Jeong, Jaeseung
author_facet Sohn, Yunkyu
Choi, Myung-Kyu
Ahn, Yong-Yeol
Lee, Junho
Jeong, Jaeseung
author_sort Sohn, Yunkyu
collection PubMed
description The modular organization of networks of individual neurons interwoven through synapses has not been fully explored due to the incredible complexity of the connectivity architecture. Here we use the modularity-based community detection method for directed, weighted networks to examine hierarchically organized modules in the complete wiring diagram (connectome) of Caenorhabditis elegans (C. elegans) and to investigate their topological properties. Incorporating bilateral symmetry of the network as an important cue for proper cluster assignment, we identified anatomical clusters in the C. elegans connectome, including a body-spanning cluster, which correspond to experimentally identified functional circuits. Moreover, the hierarchical organization of the five clusters explains the systemic cooperation (e.g., mechanosensation, chemosensation, and navigation) that occurs among the structurally segregated biological circuits to produce higher-order complex behaviors.
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spelling pubmed-30982222011-05-27 Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome Sohn, Yunkyu Choi, Myung-Kyu Ahn, Yong-Yeol Lee, Junho Jeong, Jaeseung PLoS Comput Biol Research Article The modular organization of networks of individual neurons interwoven through synapses has not been fully explored due to the incredible complexity of the connectivity architecture. Here we use the modularity-based community detection method for directed, weighted networks to examine hierarchically organized modules in the complete wiring diagram (connectome) of Caenorhabditis elegans (C. elegans) and to investigate their topological properties. Incorporating bilateral symmetry of the network as an important cue for proper cluster assignment, we identified anatomical clusters in the C. elegans connectome, including a body-spanning cluster, which correspond to experimentally identified functional circuits. Moreover, the hierarchical organization of the five clusters explains the systemic cooperation (e.g., mechanosensation, chemosensation, and navigation) that occurs among the structurally segregated biological circuits to produce higher-order complex behaviors. Public Library of Science 2011-05-19 /pmc/articles/PMC3098222/ /pubmed/21625578 http://dx.doi.org/10.1371/journal.pcbi.1001139 Text en Sohn et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sohn, Yunkyu
Choi, Myung-Kyu
Ahn, Yong-Yeol
Lee, Junho
Jeong, Jaeseung
Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
title Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
title_full Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
title_fullStr Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
title_full_unstemmed Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
title_short Topological Cluster Analysis Reveals the Systemic Organization of the Caenorhabditis elegans Connectome
title_sort topological cluster analysis reveals the systemic organization of the caenorhabditis elegans connectome
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098222/
https://www.ncbi.nlm.nih.gov/pubmed/21625578
http://dx.doi.org/10.1371/journal.pcbi.1001139
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