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GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres

Glycomics is a discipline of biology that deals with the structure and function of glycans (or carbohydrates). Analytical techniques such as mass spectrometry (MS) and nuclear magnetic resonance (NMR) are having a significant impact on the field of glycomics. However, effective progress in glycomics...

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Detalles Bibliográficos
Autores principales: Visvanathan, Mahesh, Siddam, Sasidhar R, Lee, In-Hee, Lushington, Gerald H, Bousfield, George R
Formato: Texto
Lenguaje:English
Publicado: Bentham Open 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098536/
https://www.ncbi.nlm.nih.gov/pubmed/21603090
http://dx.doi.org/10.2174/1874431101105010009
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author Visvanathan, Mahesh
Siddam, Sasidhar R
Lee, In-Hee
Lushington, Gerald H
Bousfield, George R
author_facet Visvanathan, Mahesh
Siddam, Sasidhar R
Lee, In-Hee
Lushington, Gerald H
Bousfield, George R
author_sort Visvanathan, Mahesh
collection PubMed
description Glycomics is a discipline of biology that deals with the structure and function of glycans (or carbohydrates). Analytical techniques such as mass spectrometry (MS) and nuclear magnetic resonance (NMR) are having a significant impact on the field of glycomics. However, effective progress in glycomics research requires collaboration between laboratories to share experimental data, structural information of glycans, and simulation results. Herein we report the development of a web-based data management system that can incorporate large volumes of data from disparate sources and organize them into a uniform format for users to store and access. This system enables participating laboratories to set up a shared data repository which members of interdisciplinary teams can access. The system is able to manage and share raw MS data and structural information of glycans. The database is available at http://www.glycomics.bcf.ku.edu
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spelling pubmed-30985362011-05-20 GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres Visvanathan, Mahesh Siddam, Sasidhar R Lee, In-Hee Lushington, Gerald H Bousfield, George R Open Med Inform J Article Glycomics is a discipline of biology that deals with the structure and function of glycans (or carbohydrates). Analytical techniques such as mass spectrometry (MS) and nuclear magnetic resonance (NMR) are having a significant impact on the field of glycomics. However, effective progress in glycomics research requires collaboration between laboratories to share experimental data, structural information of glycans, and simulation results. Herein we report the development of a web-based data management system that can incorporate large volumes of data from disparate sources and organize them into a uniform format for users to store and access. This system enables participating laboratories to set up a shared data repository which members of interdisciplinary teams can access. The system is able to manage and share raw MS data and structural information of glycans. The database is available at http://www.glycomics.bcf.ku.edu Bentham Open 2011-04-19 /pmc/articles/PMC3098536/ /pubmed/21603090 http://dx.doi.org/10.2174/1874431101105010009 Text en © Visvanathan et al.; Licensee Bentham Open. http://creativecommons.org/licenses/by-nc/3.0/ This is an open access article licensed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited.
spellingShingle Article
Visvanathan, Mahesh
Siddam, Sasidhar R
Lee, In-Hee
Lushington, Gerald H
Bousfield, George R
GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres
title GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres
title_full GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres
title_fullStr GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres
title_full_unstemmed GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres
title_short GlycomicsDB - A Data Integration Platform for Glycans and their Strucutres
title_sort glycomicsdb - a data integration platform for glycans and their strucutres
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098536/
https://www.ncbi.nlm.nih.gov/pubmed/21603090
http://dx.doi.org/10.2174/1874431101105010009
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