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The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes
Transcription is one of the most fundamental nuclear functions and is an enzyme complex-mediated reaction that converts DNA sequences into mRNA. Analyzing DNA sequences of 5′-flanking regions of several human genes that respond to 12-O-tetradecanoyl-phorbol-13-acetate (TPA) in HL-60 cells, we have i...
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Formato: | Texto |
Lenguaje: | English |
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SP Birkhäuser Verlag Basel
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3101357/ https://www.ncbi.nlm.nih.gov/pubmed/21461879 http://dx.doi.org/10.1007/s00018-011-0674-x |
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author | Uchiumi, Fumiaki Miyazaki, Satoru Tanuma, Sei-ichi |
author_facet | Uchiumi, Fumiaki Miyazaki, Satoru Tanuma, Sei-ichi |
author_sort | Uchiumi, Fumiaki |
collection | PubMed |
description | Transcription is one of the most fundamental nuclear functions and is an enzyme complex-mediated reaction that converts DNA sequences into mRNA. Analyzing DNA sequences of 5′-flanking regions of several human genes that respond to 12-O-tetradecanoyl-phorbol-13-acetate (TPA) in HL-60 cells, we have identified that the ets (GGAA) motifs are duplicated, overlapped, or clustered within a 500-bp distance from the most 5′-upstream region of the cDNA. Multiple protein factors including Ets family proteins are known to recognize and bind to the GGAA containing sequences. In addition, it has been reported that the ets motifs play important roles in regulation of various promoters. Here, we propose a molecular mechanism, defined by the presence of duplication and multiplication of the GGAA motifs, that is responsible for the initiation of transcription of several genes and for the recruitment of binding proteins to the transcription start site (TSS) of TATA-less promoters. |
format | Text |
id | pubmed-3101357 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | SP Birkhäuser Verlag Basel |
record_format | MEDLINE/PubMed |
spelling | pubmed-31013572011-07-14 The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes Uchiumi, Fumiaki Miyazaki, Satoru Tanuma, Sei-ichi Cell Mol Life Sci Review Transcription is one of the most fundamental nuclear functions and is an enzyme complex-mediated reaction that converts DNA sequences into mRNA. Analyzing DNA sequences of 5′-flanking regions of several human genes that respond to 12-O-tetradecanoyl-phorbol-13-acetate (TPA) in HL-60 cells, we have identified that the ets (GGAA) motifs are duplicated, overlapped, or clustered within a 500-bp distance from the most 5′-upstream region of the cDNA. Multiple protein factors including Ets family proteins are known to recognize and bind to the GGAA containing sequences. In addition, it has been reported that the ets motifs play important roles in regulation of various promoters. Here, we propose a molecular mechanism, defined by the presence of duplication and multiplication of the GGAA motifs, that is responsible for the initiation of transcription of several genes and for the recruitment of binding proteins to the transcription start site (TSS) of TATA-less promoters. SP Birkhäuser Verlag Basel 2011-04-03 2011 /pmc/articles/PMC3101357/ /pubmed/21461879 http://dx.doi.org/10.1007/s00018-011-0674-x Text en © The Author(s) 2011 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Review Uchiumi, Fumiaki Miyazaki, Satoru Tanuma, Sei-ichi The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes |
title | The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes |
title_full | The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes |
title_fullStr | The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes |
title_full_unstemmed | The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes |
title_short | The possible functions of duplicated ets (GGAA) motifs located near transcription start sites of various human genes |
title_sort | possible functions of duplicated ets (ggaa) motifs located near transcription start sites of various human genes |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3101357/ https://www.ncbi.nlm.nih.gov/pubmed/21461879 http://dx.doi.org/10.1007/s00018-011-0674-x |
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