Cargando…

Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes

BACKGROUND: The extremely halophilic archaea are present worldwide in saline environments and have important biotechnological applications. Ten complete genomes of haloarchaea are now available, providing an opportunity for comparative analysis. METHODOLOGY/PRINCIPAL FINDINGS: We report here the com...

Descripción completa

Detalles Bibliográficos
Autores principales:	Anderson, Iain, Scheuner, Carmen, Göker, Markus, Mavromatis, Kostas, Hooper, Sean D., Porat, Iris, Klenk, Hans-Peter, Ivanova, Natalia, Kyrpides, Nikos
Formato:	Texto
Lenguaje:	English
Publicado:	Public Library of Science 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3102087/ https://www.ncbi.nlm.nih.gov/pubmed/21633497 http://dx.doi.org/10.1371/journal.pone.0020237

Ejemplares similares

A Glimpse of the genomic diversity of haloarchaeal tailed viruses
por: Senčilo, Ana, et al.
Publicado: (2014)

A taxonomic framework for emerging groups of ecologically important marine gammaproteobacteria based on the reconstruction of evolutionary relationships using genome-scale data
por: Spring, Stefan, et al.
Publicado: (2015)

Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
por: Mavromatis, Konstantinos, et al.
Publicado: (2009)

Estimating DNA coverage and abundance in metagenomes using a gamma approximation
por: Hooper, Sean D., et al.
Publicado: (2010)

Genomics of Aerobic Cellulose Utilization Systems in Actinobacteria
por: Anderson, Iain, et al.
Publicado: (2012)

Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
por: Mavromatis, Konstantinos, et al.
Publicado: (2009)

Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach
por: Hooper, Sean D., et al.
Publicado: (2009)

Microbial co-habitation and lateral gene transfer: what transposases can tell us
por: Hooper, Sean D, et al.
Publicado: (2009)

In Silico Analysis of the Enzymes Involved in Haloarchaeal Denitrification
por: Bernabeu, Eric, et al.
Publicado: (2021)

Analysis of haloarchaeal twin-arginine translocase pathway reveals the diversity of the machineries
por: Ghosh, Deepanjan, et al.
Publicado: (2019)

Codivergence of Mycoviruses with Their Hosts
por: Göker, Markus, et al.
Publicado: (2011)

The Complete Multipartite Genome Sequence of Cupriavidus necator JMP134, a Versatile Pollutant Degrader
por: Lykidis, Athanasios, et al.
Publicado: (2010)

HaloWeb: the haloarchaeal genomes database
por: DasSarma, Satyajit L, et al.
Publicado: (2010)

Identification of polyhydroxyalkanoates in Halococcus and other haloarchaeal species
por: Legat, Andrea, et al.
Publicado: (2010)

Horizontal Gene Transfer, Dispersal and Haloarchaeal Speciation
por: Papke, R. Thane, et al.
Publicado: (2015)

Improving Microbial Genome Annotations in an Integrated Database Context
por: Chen, I-Min A., et al.
Publicado: (2013)

Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T))
por: Frank, Oliver, et al.
Publicado: (2014)

Genome sequence of the Roseovarius mucosus type strain (DSM 17069(T)), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii
por: Riedel, Thomas, et al.
Publicado: (2015)

The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota
por: Anderson, Iain J, et al.
Publicado: (2009)

Mutational and Bioinformatic Analysis of Haloarchaeal Lipobox-Containing Proteins
por: Storf, Stefanie, et al.
Publicado: (2010)

Quantifying Homologous Replacement of Loci between Haloarchaeal Species
por: Williams, David, et al.
Publicado: (2012)

A Synthetic Riboswitch to Regulate Haloarchaeal Gene Expression
por: Born, Johannes, et al.
Publicado: (2021)

SOP for pathway inference in Integrated Microbial Genomes (IMG)
por: Anderson, Iain, et al.
Publicado: (2011)

Complete genome sequence of DSM 30083(T), the type strain (U5/41(T)) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
por: Meier-Kolthoff, Jan P, et al.
Publicado: (2014)

Acidophilic haloarchaeal strains are isolated from various solar salts
por: Minegishi, Hiroaki, et al.
Publicado: (2008)

Related haloarchaeal pleomorphic viruses contain different genome types
por: Senčilo, Ana, et al.
Publicado: (2012)

Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux
por: Lynch, Erin A., et al.
Publicado: (2012)

Monitoring Physiological Changes in Haloarchaeal Cell during Virus Release
por: Svirskaitė, Julija, et al.
Publicado: (2016)

Interaction of Haloarchaeal Gas Vesicle Proteins Determined by Split-GFP
por: Winter, Kerstin, et al.
Publicado: (2018)

Haloarchaeal Carotenoids: Healthy Novel Compounds from Extreme Environments
por: Giani, Micaela, et al.
Publicado: (2019)

Genome sequence of the Wenxinia marina type strain (DSM 24838(T)), a representative of the Roseobacter group isolated from oilfield sediments
por: Riedel, Thomas, et al.
Publicado: (2014)

Genome-Based Taxonomic Classification of Bacteroidetes
por: Hahnke, Richard L., et al.
Publicado: (2016)

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes
por: Hahnke, Richard L., et al.
Publicado: (2018)

Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.
por: Breider, Sven, et al.
Publicado: (2014)

Genome sequence of the exopolysaccharide-producing Salipiger mucosus type strain (DSM 16094(T)), a moderately halophilic member of the Roseobacter clade
por: Riedel, Thomas, et al.
Publicado: (2014)

Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
por: Riedel, Thomas, et al.
Publicado: (2013)

Phylogeny of Rieske/cytb Complexes with a Special Focus on the Haloarchaeal Enzymes
por: Baymann, Frauke, et al.
Publicado: (2012)

Presence of a Haloarchaeal Halorhodopsin-Like Cl(−) Pump in Marine Bacteria
por: Nakajima, Yu, et al.
Publicado: (2018)

High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
por: Nouioui, Imen, et al.
Publicado: (2017)

Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae
por: Scheuner, Carmen, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_qgpmd9npvfsm9b8nkk4hdl9go4