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Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control
Genetic circuits in bacteria are intimately coupled to the cellular growth rate as many parameters of gene expression are growth-rate dependent. Growth-rate dependence can be particularly pronounced for genes on plasmids; therefore the native regulatory systems of a plasmid such as its replication c...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3103578/ https://www.ncbi.nlm.nih.gov/pubmed/21647376 http://dx.doi.org/10.1371/journal.pone.0020403 |
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author | Klumpp, Stefan |
author_facet | Klumpp, Stefan |
author_sort | Klumpp, Stefan |
collection | PubMed |
description | Genetic circuits in bacteria are intimately coupled to the cellular growth rate as many parameters of gene expression are growth-rate dependent. Growth-rate dependence can be particularly pronounced for genes on plasmids; therefore the native regulatory systems of a plasmid such as its replication control system are characterized by growth-rate dependent parameters and regulator concentrations. This natural growth-rate dependent variation of regulator concentrations can be used for a quantitative analysis of the design of such regulatory systems. Here we analyze the growth-rate dependence of parameters of the copy number control system of ColE1-type plasmids in E. coli. This analysis allows us to infer the form of the control function and suggests that the Rom protein increases the sensitivity of control. |
format | Text |
id | pubmed-3103578 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31035782011-06-06 Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control Klumpp, Stefan PLoS One Research Article Genetic circuits in bacteria are intimately coupled to the cellular growth rate as many parameters of gene expression are growth-rate dependent. Growth-rate dependence can be particularly pronounced for genes on plasmids; therefore the native regulatory systems of a plasmid such as its replication control system are characterized by growth-rate dependent parameters and regulator concentrations. This natural growth-rate dependent variation of regulator concentrations can be used for a quantitative analysis of the design of such regulatory systems. Here we analyze the growth-rate dependence of parameters of the copy number control system of ColE1-type plasmids in E. coli. This analysis allows us to infer the form of the control function and suggests that the Rom protein increases the sensitivity of control. Public Library of Science 2011-05-27 /pmc/articles/PMC3103578/ /pubmed/21647376 http://dx.doi.org/10.1371/journal.pone.0020403 Text en Klumpp. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Klumpp, Stefan Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control |
title | Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control |
title_full | Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control |
title_fullStr | Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control |
title_full_unstemmed | Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control |
title_short | Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control |
title_sort | growth-rate dependence reveals design principles of plasmid copy number control |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3103578/ https://www.ncbi.nlm.nih.gov/pubmed/21647376 http://dx.doi.org/10.1371/journal.pone.0020403 |
work_keys_str_mv | AT klumppstefan growthratedependencerevealsdesignprinciplesofplasmidcopynumbercontrol |