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The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding

Protein MobM, the relaxase involved in conjugative transfer of the streptococcal plasmid pMV158, is the prototype of the MOB(V) superfamily of relaxases. To characterize the DNA-binding and nicking domain of MobM, a truncated version of the protein (MobMN199) encompassing its N-terminal region was d...

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Autores principales: Lorenzo-Díaz, Fabián, Dostál, Lubomir, Coll, Miquel, Schildbach, Joel F., Menéndez, Margarita, Espinosa, Manuel
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105389/
https://www.ncbi.nlm.nih.gov/pubmed/21296755
http://dx.doi.org/10.1093/nar/gkr049
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author Lorenzo-Díaz, Fabián
Dostál, Lubomir
Coll, Miquel
Schildbach, Joel F.
Menéndez, Margarita
Espinosa, Manuel
author_facet Lorenzo-Díaz, Fabián
Dostál, Lubomir
Coll, Miquel
Schildbach, Joel F.
Menéndez, Margarita
Espinosa, Manuel
author_sort Lorenzo-Díaz, Fabián
collection PubMed
description Protein MobM, the relaxase involved in conjugative transfer of the streptococcal plasmid pMV158, is the prototype of the MOB(V) superfamily of relaxases. To characterize the DNA-binding and nicking domain of MobM, a truncated version of the protein (MobMN199) encompassing its N-terminal region was designed and the protein was purified. MobMN199 was monomeric in contrast to the dimeric form of the full-length protein, but it kept its nicking activity on pMV158 DNA. The optimal relaxase activity was dependent on Mn(2+) or Mg(2+) cations in a dosage-dependent manner. However, whereas Mn(2+) strongly stabilized MobMN199 against thermal denaturation, no protective effect was observed for Mg(2+). Furthermore, MobMN199 exhibited a high affinity binding for Mn(2+) but not for Mg(2+). We also examined the binding-specificity and affinity of MobMN199 for several substrates of single-stranded DNA encompassing the pMV158 origin of transfer (oriT). The minimal oriT was delimited to a stretch of 26 nt which included an inverted repeat located eight bases upstream of the nick site. The structure of MobMN199 was strongly stabilized by binding to the defined target DNA, indicating the formation of a tight protein–DNA complex. We demonstrate that the oriT recognition by MobMN199 was highly specific and suggest that this protein most probably employs Mn(2+) during pMV158 transfer.
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spelling pubmed-31053892011-06-01 The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding Lorenzo-Díaz, Fabián Dostál, Lubomir Coll, Miquel Schildbach, Joel F. Menéndez, Margarita Espinosa, Manuel Nucleic Acids Res Molecular Biology Protein MobM, the relaxase involved in conjugative transfer of the streptococcal plasmid pMV158, is the prototype of the MOB(V) superfamily of relaxases. To characterize the DNA-binding and nicking domain of MobM, a truncated version of the protein (MobMN199) encompassing its N-terminal region was designed and the protein was purified. MobMN199 was monomeric in contrast to the dimeric form of the full-length protein, but it kept its nicking activity on pMV158 DNA. The optimal relaxase activity was dependent on Mn(2+) or Mg(2+) cations in a dosage-dependent manner. However, whereas Mn(2+) strongly stabilized MobMN199 against thermal denaturation, no protective effect was observed for Mg(2+). Furthermore, MobMN199 exhibited a high affinity binding for Mn(2+) but not for Mg(2+). We also examined the binding-specificity and affinity of MobMN199 for several substrates of single-stranded DNA encompassing the pMV158 origin of transfer (oriT). The minimal oriT was delimited to a stretch of 26 nt which included an inverted repeat located eight bases upstream of the nick site. The structure of MobMN199 was strongly stabilized by binding to the defined target DNA, indicating the formation of a tight protein–DNA complex. We demonstrate that the oriT recognition by MobMN199 was highly specific and suggest that this protein most probably employs Mn(2+) during pMV158 transfer. Oxford University Press 2011-05 2011-02-03 /pmc/articles/PMC3105389/ /pubmed/21296755 http://dx.doi.org/10.1093/nar/gkr049 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Molecular Biology
Lorenzo-Díaz, Fabián
Dostál, Lubomir
Coll, Miquel
Schildbach, Joel F.
Menéndez, Margarita
Espinosa, Manuel
The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding
title The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding
title_full The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding
title_fullStr The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding
title_full_unstemmed The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding
title_short The MobM relaxase domain of plasmid pMV158: thermal stability and activity upon Mn(2+) and specific DNA binding
title_sort mobm relaxase domain of plasmid pmv158: thermal stability and activity upon mn(2+) and specific dna binding
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105389/
https://www.ncbi.nlm.nih.gov/pubmed/21296755
http://dx.doi.org/10.1093/nar/gkr049
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