Cargando…

Theoretical basis of the community effect in development

BACKGROUND: Genetically identical cells often show significant variation in gene expression profile and behaviour even in the same physiological condition. Notably, embryonic cells destined to the same tissue maintain a uniform transcriptional regulatory state and form a homogeneous cell group. One...

Descripción completa

Detalles Bibliográficos
Autores principales: Saka, Yasushi, Lhoussaine, Cédric, Kuttler, Celine, Ullner, Ekkehard, Thiel, Marco
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105943/
https://www.ncbi.nlm.nih.gov/pubmed/21496342
http://dx.doi.org/10.1186/1752-0509-5-54
_version_ 1782204744428683264
author Saka, Yasushi
Lhoussaine, Cédric
Kuttler, Celine
Ullner, Ekkehard
Thiel, Marco
author_facet Saka, Yasushi
Lhoussaine, Cédric
Kuttler, Celine
Ullner, Ekkehard
Thiel, Marco
author_sort Saka, Yasushi
collection PubMed
description BACKGROUND: Genetically identical cells often show significant variation in gene expression profile and behaviour even in the same physiological condition. Notably, embryonic cells destined to the same tissue maintain a uniform transcriptional regulatory state and form a homogeneous cell group. One mechanism to keep the homogeneity within embryonic tissues is the so-called community effect in animal development. The community effect is an interaction among a group of many nearby precursor cells, and is necessary for them to maintain tissue-specific gene expression and differentiate in a coordinated manner. Although it has been shown that the cell-cell communication by a diffusible factor plays a crucial role, it is not immediately obvious why a community effect needs many cells. RESULTS: In this work, we propose a model of the community effect in development, which consists in a linear gene cascade and cell-cell communication. We examined the properties of the model theoretically using a combination of stochastic and deterministic modelling methods. We have derived the analytical formula for the threshold size of a cell population that is necessary for a community effect, which is in good agreement with stochastic simulation results. CONCLUSIONS: Our theoretical analysis indicates that a simple model with a linear gene cascade and cell-cell communication is sufficient to reproduce the community effect in development. The model explains why a community needs many cells. It suggests that the community's long-term behaviour is independent of the initial induction level, although the initiation of a community effect requires a sufficient amount of inducing signal. The mechanism of the community effect revealed by our theoretical analysis is analogous to that of quorum sensing in bacteria. The community effect may underlie the size control in animal development and also the genesis of autosomal dominant diseases including tumorigenesis.
format Text
id pubmed-3105943
institution National Center for Biotechnology Information
language English
publishDate 2011
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-31059432011-06-02 Theoretical basis of the community effect in development Saka, Yasushi Lhoussaine, Cédric Kuttler, Celine Ullner, Ekkehard Thiel, Marco BMC Syst Biol Research Article BACKGROUND: Genetically identical cells often show significant variation in gene expression profile and behaviour even in the same physiological condition. Notably, embryonic cells destined to the same tissue maintain a uniform transcriptional regulatory state and form a homogeneous cell group. One mechanism to keep the homogeneity within embryonic tissues is the so-called community effect in animal development. The community effect is an interaction among a group of many nearby precursor cells, and is necessary for them to maintain tissue-specific gene expression and differentiate in a coordinated manner. Although it has been shown that the cell-cell communication by a diffusible factor plays a crucial role, it is not immediately obvious why a community effect needs many cells. RESULTS: In this work, we propose a model of the community effect in development, which consists in a linear gene cascade and cell-cell communication. We examined the properties of the model theoretically using a combination of stochastic and deterministic modelling methods. We have derived the analytical formula for the threshold size of a cell population that is necessary for a community effect, which is in good agreement with stochastic simulation results. CONCLUSIONS: Our theoretical analysis indicates that a simple model with a linear gene cascade and cell-cell communication is sufficient to reproduce the community effect in development. The model explains why a community needs many cells. It suggests that the community's long-term behaviour is independent of the initial induction level, although the initiation of a community effect requires a sufficient amount of inducing signal. The mechanism of the community effect revealed by our theoretical analysis is analogous to that of quorum sensing in bacteria. The community effect may underlie the size control in animal development and also the genesis of autosomal dominant diseases including tumorigenesis. BioMed Central 2011-04-17 /pmc/articles/PMC3105943/ /pubmed/21496342 http://dx.doi.org/10.1186/1752-0509-5-54 Text en Copyright ©2011 Saka et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Saka, Yasushi
Lhoussaine, Cédric
Kuttler, Celine
Ullner, Ekkehard
Thiel, Marco
Theoretical basis of the community effect in development
title Theoretical basis of the community effect in development
title_full Theoretical basis of the community effect in development
title_fullStr Theoretical basis of the community effect in development
title_full_unstemmed Theoretical basis of the community effect in development
title_short Theoretical basis of the community effect in development
title_sort theoretical basis of the community effect in development
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105943/
https://www.ncbi.nlm.nih.gov/pubmed/21496342
http://dx.doi.org/10.1186/1752-0509-5-54
work_keys_str_mv AT sakayasushi theoreticalbasisofthecommunityeffectindevelopment
AT lhoussainecedric theoreticalbasisofthecommunityeffectindevelopment
AT kuttlerceline theoreticalbasisofthecommunityeffectindevelopment
AT ullnerekkehard theoreticalbasisofthecommunityeffectindevelopment
AT thielmarco theoreticalbasisofthecommunityeffectindevelopment