Cargando…

Variance adjusted weighted UniFrac: a powerful beta diversity measure for comparing communities based on phylogeny

BACKGROUND: Beta diversity, which involves the assessment of differences between communities, is an important problem in ecological studies. Many statistical methods have been developed to quantify beta diversity, and among them, UniFrac and weighted-UniFrac (W-UniFrac) are widely used. The W-UniFra...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chang, Qin, Luan, Yihui, Sun, Fengzhu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3108311/ https://www.ncbi.nlm.nih.gov/pubmed/21518444 http://dx.doi.org/10.1186/1471-2105-12-118

Ejemplares similares

Expanding the UniFrac Toolbox
por: Wong, Ruth G., et al.
Publicado: (2016)

A Commentary on Diversity Measures UniFrac in Very Small Sample Size
por: Roldán Ahumada, Judith Agueda, et al.
Publicado: (2019)

UniFrac – An online tool for comparing microbial community diversity in a phylogenetic context
por: Lozupone, Catherine, et al.
Publicado: (2006)

Finding phylogeny-aware and biologically meaningful averages of metagenomic samples: L(2)UniFrac
por: Wei, Wei, et al.
Publicado: (2023)

Finding phylogeny-aware and biologically meaningful averages of metagenomic samples: L(2)UniFrac
por: Wei, Wei, et al.
Publicado: (2023)

Equivalent input produces different output in the UniFrac significance test
por: Long, Jeffrey R, et al.
Publicado: (2014)

Associating microbiome composition with environmental covariates using generalized UniFrac distances
por: Chen, Jun, et al.
Publicado: (2012)

Optimizing UniFrac with OpenACC Yields Greater Than One Thousand Times Speed Increase
por: Sfiligoi, Igor, et al.
Publicado: (2022)

Fast UniFrac: Facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
por: Hamady, Micah, et al.
Publicado: (2009)

The unifrac significance test is sensitive to tree topology
por: Lozupone, Catherine A., et al.
Publicado: (2015)

Of beta diversity, variance, evenness, and dissimilarity
por: Ricotta, Carlo
Publicado: (2017)

Pion-$^{4}$ He scattering around the $\frac{3}{2}$, $\frac{3}{2}$ resonance
por: Binon, F, et al.
Publicado: (1975)

FraC nanopores with adjustable diameter identify the mass of opposite-charge peptides with 44 dalton resolution
por: Huang, Gang, et al.
Publicado: (2019)

On the 2P $_\frac{3}{2}$ -2S $_\frac{1}{2}$ energy difference in very light muonic systems
por: Zavattini, E
Publicado: (1975)

Simulating spin-$ \frac{3}{2}$ particles at colliders
por: Christensen, Neil D., et al.
Publicado: (2013)

New measurement of $\frac{\Delta G}{G}$ at COMPASS
por: Procureur, S.
Publicado: (2006)

Frac-seq reveals isoform-specific recruitment to polyribosomes
por: Sterne-Weiler, Timothy, et al.
Publicado: (2013)

Concerning the $\nu/N \to {1/3}$ resonance, V : analysis of the equation $\frac {d^{2}v}{{ds}^{2}}+ {(\frac {2\nu}{N})^2 v} - {(\cos2s)}v^{2} - {\lambda}{(\cos {\frac {2s}{3})}}=0$
por: Laslett, L J, et al.
Publicado: (1959)

Analysis of A Λ$\frac{0}{b}$ decay mode
por: Falla Solorzano, Maria Magdalena
Publicado: (2018)

Frac Sand Mines Are Preferentially Sited in Unzoned Rural Areas
por: Locke, Christina
Publicado: (2015)

Design of a single magnet separator with mass resolving power $\frac{m}{\Delta m} \approx 20,000$
por: Breitenfeldt, Martin, et al.
Publicado: (2016)

Statistical significance approximation for local similarity analysis of dependent time series data
por: Zhang, Fang, et al.
Publicado: (2019)

Structure of the $\beta^{+}$ (EC) decay strength function of $^{147g}Tb (T_{\frac{1}{2}} \approx 1.6 h)$
por: Izosimov, I N, et al.
Publicado: (1996)

Techniques to Measure CESR Beam Parameters: $\Beta^{*}_{x}, \Epsilon_{x}, \Epsilon_{y}, \frac{\DeltaE} {E_{beam}}$
por: Cinabro, D, et al.
Publicado: (2002)

Concerning the $\nu/N \to {1/3}$ resonance, I : application of a variational procedure and of the Moser method to the equation $\frac {d^{2}v}{dt^{2}}+ {(\frac {2\nu}{N})}^{2}v + \frac{1}{2} (\sin2t) v^{2}=0$
por: Laslett, L J
Publicado: (1959)

A measurement of $\frac{BR(D_{s}^{+} \to K^{0}K^{+})}{BR(D_{s}^{+} \to \phi\pi^{+})}$ and $\frac{BR(D_{s}^{+} \to K^{0}K^{*+})}{BR(D_{s}^{+} \to \phi\pi^{+})}$
por: Giehl, I
Publicado: (1996)

Etats-Unis : [guide /
Publicado: (1980)

Concerning the $\nu/N \to {1/3}$ resonance, III : use of the Moser method to estimate the rotation number, as a function of amplitude, for the equation $\frac {d^{2}v}{dt^{2}}+ {(\frac {2\nu}{N})}^{2}v + \frac{1}{2} (\sin2t) v^{2}=0$
por: Laslett, L J
Publicado: (1959)

Measurement of the electron structure function F$\frac{e}{2}$ at LEP energies
por: Abdallah, J, et al.
Publicado: (2014)

Prof. U. S. Nayak M.S., M.Ch., F.R.A.C.S.
por: Kini, Anand U., et al.
Publicado: (2016)

The Manipulation of the Internal Hydrophobicity of FraC Nanopores Augments Peptide Capture and Recognition
por: Lucas, Florian Leonardus Rudolfus, et al.
Publicado: (2021)

FracAtlas: A Dataset for Fracture Classification, Localization and Segmentation of Musculoskeletal Radiographs
por: Abedeen, Iftekharul, et al.
Publicado: (2023)

Recommandations Etats-Unis
Publicado: (1994)

Royaume-Uni : Turbulences
Publicado: (1994)

Phylogeny more than plant height and leaf area explains variance in seed mass
por: Wang, Yingnan, et al.
Publicado: (2023)

Diverse Taxonomies for Diverse Chemistries: Enhanced Representation of Natural Product Metabolism in UniProtKB
por: Feuermann, Marc, et al.
Publicado: (2021)

Usefulness and limitations of dK random graph models to predict interactions and functional homogeneity in biological networks under a pseudo-likelihood parameter estimation approach
por: Wang, Wenhui, et al.
Publicado: (2009)

Concerning the $\nu/N \to {1/3}$ resonance, II : application of a variational procedure and of the Moser method to the equation $\frac{d^{2}v}{dt^{2}}+ {(\frac{2\nu}{N})^2 v + {\frac{1}{2}}[{\sum_{m=1}{b_m}} \sin2mt] v^2=0}$
por: Laslett, L J
Publicado: (1959)

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase
por: MacDougall, Alistair, et al.
Publicado: (2020)

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase
por: MacDougall, Alistair, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_4fgg7uj5cp639s6pe8dsfk079j