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Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))

Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococcus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus–Thermus. Strain LB-34(T) was isolated from a soil sample from the Sonoran Desert in Arizona...

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Autores principales: Pukall, Rüdiger, Zeytun, Ahmet, Lucas, Susan, Lapidus, Alla, Hammon, Nancy, Deshpande, Shweta, Nolan, Matt, Cheng, Jan-Fang, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Mikhailova, Natalia, Ivanova, Natalia, Mavromatis, Konstantinos, Pati, Amrita, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brambilla, Evelyne-Marie, Rohde, Manfred, Göker, Markus, Detter, J. Chris, Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111983/
https://www.ncbi.nlm.nih.gov/pubmed/21677853
http://dx.doi.org/10.4056/sigs.1633949
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author Pukall, Rüdiger
Zeytun, Ahmet
Lucas, Susan
Lapidus, Alla
Hammon, Nancy
Deshpande, Shweta
Nolan, Matt
Cheng, Jan-Fang
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mikhailova, Natalia
Ivanova, Natalia
Mavromatis, Konstantinos
Pati, Amrita
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Rohde, Manfred
Göker, Markus
Detter, J. Chris
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Pukall, Rüdiger
Zeytun, Ahmet
Lucas, Susan
Lapidus, Alla
Hammon, Nancy
Deshpande, Shweta
Nolan, Matt
Cheng, Jan-Fang
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mikhailova, Natalia
Ivanova, Natalia
Mavromatis, Konstantinos
Pati, Amrita
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Rohde, Manfred
Göker, Markus
Detter, J. Chris
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Pukall, Rüdiger
collection PubMed
description Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococcus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus–Thermus. Strain LB-34(T) was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geothermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these species adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. maricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-31119832011-06-14 Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T)) Pukall, Rüdiger Zeytun, Ahmet Lucas, Susan Lapidus, Alla Hammon, Nancy Deshpande, Shweta Nolan, Matt Cheng, Jan-Fang Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Mikhailova, Natalia Ivanova, Natalia Mavromatis, Konstantinos Pati, Amrita Tapia, Roxane Han, Cliff Goodwin, Lynne Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Brambilla, Evelyne-Marie Rohde, Manfred Göker, Markus Detter, J. Chris Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococcus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus–Thermus. Strain LB-34(T) was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geothermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these species adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. maricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-04-25 /pmc/articles/PMC3111983/ /pubmed/21677853 http://dx.doi.org/10.4056/sigs.1633949 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Pukall, Rüdiger
Zeytun, Ahmet
Lucas, Susan
Lapidus, Alla
Hammon, Nancy
Deshpande, Shweta
Nolan, Matt
Cheng, Jan-Fang
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mikhailova, Natalia
Ivanova, Natalia
Mavromatis, Konstantinos
Pati, Amrita
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Rohde, Manfred
Göker, Markus
Detter, J. Chris
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
title Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
title_full Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
title_fullStr Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
title_full_unstemmed Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
title_short Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
title_sort complete genome sequence of deinococcus maricopensis type strain (lb-34(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111983/
https://www.ncbi.nlm.nih.gov/pubmed/21677853
http://dx.doi.org/10.4056/sigs.1633949
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