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Complete genome sequence of Oceanithermus profundus type strain (506(T))

Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the sali...

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Autores principales: Pati, Amrita, Zhang, Xiaojing, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Hauser, Loren, Jeffries, Cynthia D., Brambilla, Evelyne-Marie, Röhl, Alina, Mwirichia, Romano, Rohde, Manfred, Tindall, Brian J., Sikorski, Johannes, Wirth, Reinhard, Göker, Markus, Woyke, Tanja, Detter, John C., Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Land, Miriam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111992/
https://www.ncbi.nlm.nih.gov/pubmed/21677858
http://dx.doi.org/10.4056/sigs.1734292
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author Pati, Amrita
Zhang, Xiaojing
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Del Rio, Tijana Glavina
Tice, Hope
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Röhl, Alina
Mwirichia, Romano
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Wirth, Reinhard
Göker, Markus
Woyke, Tanja
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Land, Miriam
author_facet Pati, Amrita
Zhang, Xiaojing
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Del Rio, Tijana Glavina
Tice, Hope
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Röhl, Alina
Mwirichia, Romano
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Wirth, Reinhard
Göker, Markus
Woyke, Tanja
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Land, Miriam
author_sort Pati, Amrita
collection PubMed
description Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-31119922011-06-14 Complete genome sequence of Oceanithermus profundus type strain (506(T)) Pati, Amrita Zhang, Xiaojing Lapidus, Alla Nolan, Matt Lucas, Susan Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Tapia, Roxane Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Jeffries, Cynthia D. Brambilla, Evelyne-Marie Röhl, Alina Mwirichia, Romano Rohde, Manfred Tindall, Brian J. Sikorski, Johannes Wirth, Reinhard Göker, Markus Woyke, Tanja Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Land, Miriam Stand Genomic Sci Short Genome Reports Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-04-29 /pmc/articles/PMC3111992/ /pubmed/21677858 http://dx.doi.org/10.4056/sigs.1734292 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Pati, Amrita
Zhang, Xiaojing
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Del Rio, Tijana Glavina
Tice, Hope
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Röhl, Alina
Mwirichia, Romano
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Wirth, Reinhard
Göker, Markus
Woyke, Tanja
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Land, Miriam
Complete genome sequence of Oceanithermus profundus type strain (506(T))
title Complete genome sequence of Oceanithermus profundus type strain (506(T))
title_full Complete genome sequence of Oceanithermus profundus type strain (506(T))
title_fullStr Complete genome sequence of Oceanithermus profundus type strain (506(T))
title_full_unstemmed Complete genome sequence of Oceanithermus profundus type strain (506(T))
title_short Complete genome sequence of Oceanithermus profundus type strain (506(T))
title_sort complete genome sequence of oceanithermus profundus type strain (506(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111992/
https://www.ncbi.nlm.nih.gov/pubmed/21677858
http://dx.doi.org/10.4056/sigs.1734292
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