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Complete genome sequence of Oceanithermus profundus type strain (506(T))
Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the sali...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111992/ https://www.ncbi.nlm.nih.gov/pubmed/21677858 http://dx.doi.org/10.4056/sigs.1734292 |
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author | Pati, Amrita Zhang, Xiaojing Lapidus, Alla Nolan, Matt Lucas, Susan Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Tapia, Roxane Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Jeffries, Cynthia D. Brambilla, Evelyne-Marie Röhl, Alina Mwirichia, Romano Rohde, Manfred Tindall, Brian J. Sikorski, Johannes Wirth, Reinhard Göker, Markus Woyke, Tanja Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Land, Miriam |
author_facet | Pati, Amrita Zhang, Xiaojing Lapidus, Alla Nolan, Matt Lucas, Susan Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Tapia, Roxane Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Jeffries, Cynthia D. Brambilla, Evelyne-Marie Röhl, Alina Mwirichia, Romano Rohde, Manfred Tindall, Brian J. Sikorski, Johannes Wirth, Reinhard Göker, Markus Woyke, Tanja Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Land, Miriam |
author_sort | Pati, Amrita |
collection | PubMed |
description | Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Online Article Text |
id | pubmed-3111992 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-31119922011-06-14 Complete genome sequence of Oceanithermus profundus type strain (506(T)) Pati, Amrita Zhang, Xiaojing Lapidus, Alla Nolan, Matt Lucas, Susan Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Tapia, Roxane Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Jeffries, Cynthia D. Brambilla, Evelyne-Marie Röhl, Alina Mwirichia, Romano Rohde, Manfred Tindall, Brian J. Sikorski, Johannes Wirth, Reinhard Göker, Markus Woyke, Tanja Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Land, Miriam Stand Genomic Sci Short Genome Reports Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-04-29 /pmc/articles/PMC3111992/ /pubmed/21677858 http://dx.doi.org/10.4056/sigs.1734292 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Pati, Amrita Zhang, Xiaojing Lapidus, Alla Nolan, Matt Lucas, Susan Del Rio, Tijana Glavina Tice, Hope Cheng, Jan-Fang Tapia, Roxane Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Hauser, Loren Jeffries, Cynthia D. Brambilla, Evelyne-Marie Röhl, Alina Mwirichia, Romano Rohde, Manfred Tindall, Brian J. Sikorski, Johannes Wirth, Reinhard Göker, Markus Woyke, Tanja Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Land, Miriam Complete genome sequence of Oceanithermus profundus type strain (506(T)) |
title | Complete genome sequence of Oceanithermus profundus type strain (506(T)) |
title_full | Complete genome sequence of Oceanithermus profundus type strain (506(T)) |
title_fullStr | Complete genome sequence of Oceanithermus profundus type strain (506(T)) |
title_full_unstemmed | Complete genome sequence of Oceanithermus profundus type strain (506(T)) |
title_short | Complete genome sequence of Oceanithermus profundus type strain (506(T)) |
title_sort | complete genome sequence of oceanithermus profundus type strain (506(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111992/ https://www.ncbi.nlm.nih.gov/pubmed/21677858 http://dx.doi.org/10.4056/sigs.1734292 |
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