Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))

Cellulophaga lytica (Lewin 1969) Johansen et al. 1999 is the type species of the genus Cellulophaga, which belongs to the family Flavobacteriaceae within the phylum 'Bacteroidetes' and was isolated from marine beach mud in Limon, Costa Rica. The species is of biotechnological interest beca...

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Autores principales: Pati, Amrita, Abt, Birte, Teshima, Hazuki, Nolan, Matt, Lapidus, Alla, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Mavromatis, Konstantinos, Ovchinikova, Galina, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Jeffries, Cynthia D., Detter, John C., Brambilla, Evelyne-Marie, Kannan, K. Palani, Rohde, Manfred, Spring, Stefan, Göker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Ivanova, Natalia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Short Genome Reports
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111997/
https://www.ncbi.nlm.nih.gov/pubmed/21677859
http://dx.doi.org/10.4056/sigs.1774329
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author Pati, Amrita
Abt, Birte
Teshima, Hazuki
Nolan, Matt
Lapidus, Alla
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Jeffries, Cynthia D.
Detter, John C.
Brambilla, Evelyne-Marie
Kannan, K. Palani
Rohde, Manfred
Spring, Stefan
Göker, Markus
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Ivanova, Natalia
author_facet Pati, Amrita
Abt, Birte
Teshima, Hazuki
Nolan, Matt
Lapidus, Alla
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Jeffries, Cynthia D.
Detter, John C.
Brambilla, Evelyne-Marie
Kannan, K. Palani
Rohde, Manfred
Spring, Stefan
Göker, Markus
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Ivanova, Natalia
author_sort Pati, Amrita
collection PubMed
description Cellulophaga lytica (Lewin 1969) Johansen et al. 1999 is the type species of the genus Cellulophaga, which belongs to the family Flavobacteriaceae within the phylum 'Bacteroidetes' and was isolated from marine beach mud in Limon, Costa Rica. The species is of biotechnological interest because its members produce a wide range of extracellular enzymes capable of degrading proteins and polysaccharides. After the genome sequence of Cellulophaga algicola this is the second completed genome sequence of a member of the genus Cellulophaga. The 3,765,936 bp long genome with its 3,303 protein-coding and 55 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-31119972011-06-14 Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T)) Pati, Amrita Abt, Birte Teshima, Hazuki Nolan, Matt Lapidus, Alla Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxane Han, Cliff Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Jeffries, Cynthia D. Detter, John C. Brambilla, Evelyne-Marie Kannan, K. Palani Rohde, Manfred Spring, Stefan Göker, Markus Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Ivanova, Natalia Stand Genomic Sci Short Genome Reports Cellulophaga lytica (Lewin 1969) Johansen et al. 1999 is the type species of the genus Cellulophaga, which belongs to the family Flavobacteriaceae within the phylum 'Bacteroidetes' and was isolated from marine beach mud in Limon, Costa Rica. The species is of biotechnological interest because its members produce a wide range of extracellular enzymes capable of degrading proteins and polysaccharides. After the genome sequence of Cellulophaga algicola this is the second completed genome sequence of a member of the genus Cellulophaga. The 3,765,936 bp long genome with its 3,303 protein-coding and 55 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-04-29 /pmc/articles/PMC3111997/ /pubmed/21677859 http://dx.doi.org/10.4056/sigs.1774329 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Pati, Amrita
Abt, Birte
Teshima, Hazuki
Nolan, Matt
Lapidus, Alla
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Jeffries, Cynthia D.
Detter, John C.
Brambilla, Evelyne-Marie
Kannan, K. Palani
Rohde, Manfred
Spring, Stefan
Göker, Markus
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Ivanova, Natalia
Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))
title Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))
title_full Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))
title_fullStr Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))
title_full_unstemmed Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))
title_short Complete genome sequence of Cellulophaga lytica type strain (LIM-21(T))
title_sort complete genome sequence of cellulophaga lytica type strain (lim-21(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111997/
https://www.ncbi.nlm.nih.gov/pubmed/21677859
http://dx.doi.org/10.4056/sigs.1774329
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