GRISOTTO: A greedy approach to improve combinatorial algorithms for motif discovery with prior knowledge

BACKGROUND: Position-specific priors (PSP) have been used with success to boost EM and Gibbs sampler-based motif discovery algorithms. PSP information has been computed from different sources, including orthologous conservation, DNA duplex stability, and nucleosome positioning. The use of prior info...

Descripción completa

Detalles Bibliográficos
Autores principales: Carvalho, Alexandra M, Oliveira, Arlindo L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3112114/
https://www.ncbi.nlm.nih.gov/pubmed/21513505
http://dx.doi.org/10.1186/1748-7188-6-13

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3112114/
https://www.ncbi.nlm.nih.gov/pubmed/21513505
http://dx.doi.org/10.1186/1748-7188-6-13

Ejemplares similares