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Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment

Periods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression...

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Autores principales: Tsumoto, Kunichika, Kurosawa, Gen, Yoshinaga, Tetsuya, Aihara, Kazuyuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3116846/
https://www.ncbi.nlm.nih.gov/pubmed/21698191
http://dx.doi.org/10.1371/journal.pone.0020880
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author Tsumoto, Kunichika
Kurosawa, Gen
Yoshinaga, Tetsuya
Aihara, Kazuyuki
author_facet Tsumoto, Kunichika
Kurosawa, Gen
Yoshinaga, Tetsuya
Aihara, Kazuyuki
author_sort Tsumoto, Kunichika
collection PubMed
description Periods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression of specific clock genes. This molecular response to light is called light adaptation. Does light adaptation occur in other organisms? Using published experimental data, we first estimated the time course of the up-regulation rate of gene expression by light. Intriguingly, the estimated up-regulation rate was transient during light period in mice as well as Neurospora. Next, we constructed a computational model to consider how light adaptation had an effect on the entrainment of circadian oscillation to 24-h light-dark cycles. We found that cellular oscillations are more likely to be destabilized without light adaption especially when light intensity is very high. From the present results, we predict that the instability of circadian oscillations under 24-h light-dark cycles can be experimentally observed if light adaptation is altered. We conclude that the functional consequence of light adaptation is to increase the adjustability to 24-h light-dark cycles and then adapt to fluctuating environments in nature.
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spelling pubmed-31168462011-06-22 Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment Tsumoto, Kunichika Kurosawa, Gen Yoshinaga, Tetsuya Aihara, Kazuyuki PLoS One Research Article Periods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression of specific clock genes. This molecular response to light is called light adaptation. Does light adaptation occur in other organisms? Using published experimental data, we first estimated the time course of the up-regulation rate of gene expression by light. Intriguingly, the estimated up-regulation rate was transient during light period in mice as well as Neurospora. Next, we constructed a computational model to consider how light adaptation had an effect on the entrainment of circadian oscillation to 24-h light-dark cycles. We found that cellular oscillations are more likely to be destabilized without light adaption especially when light intensity is very high. From the present results, we predict that the instability of circadian oscillations under 24-h light-dark cycles can be experimentally observed if light adaptation is altered. We conclude that the functional consequence of light adaptation is to increase the adjustability to 24-h light-dark cycles and then adapt to fluctuating environments in nature. Public Library of Science 2011-06-16 /pmc/articles/PMC3116846/ /pubmed/21698191 http://dx.doi.org/10.1371/journal.pone.0020880 Text en Tsumoto et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Tsumoto, Kunichika
Kurosawa, Gen
Yoshinaga, Tetsuya
Aihara, Kazuyuki
Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment
title Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment
title_full Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment
title_fullStr Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment
title_full_unstemmed Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment
title_short Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment
title_sort modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3116846/
https://www.ncbi.nlm.nih.gov/pubmed/21698191
http://dx.doi.org/10.1371/journal.pone.0020880
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