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Creating views on integrated multidomain data

Motivation: Modern data acquisition methods in biology allow the procurement of different types of data in increasing quantity, facilitating a comprehensive view of biological systems. As data are usually gathered and interpreted by separate domain scientists, it is hard to grasp multidomain propert...

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Detalles Bibliográficos
Autores principales: Rohn, Hendrik, Klukas, Christian, Schreiber, Falk
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117374/
https://www.ncbi.nlm.nih.gov/pubmed/21551150
http://dx.doi.org/10.1093/bioinformatics/btr282
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author Rohn, Hendrik
Klukas, Christian
Schreiber, Falk
author_facet Rohn, Hendrik
Klukas, Christian
Schreiber, Falk
author_sort Rohn, Hendrik
collection PubMed
description Motivation: Modern data acquisition methods in biology allow the procurement of different types of data in increasing quantity, facilitating a comprehensive view of biological systems. As data are usually gathered and interpreted by separate domain scientists, it is hard to grasp multidomain properties and structures. Consequently, there is a need for the integration of biological data from different sources and of different types in one application, providing various visualization approaches. Results: In this article, methods for the integration and visualization of multimodal biological data are presented. This is achieved based on two graphs representing the meta-relations between biological data and the measurement combinations, respectively. Both graphs are linked and serve as different views of the integrated data with navigation and exploration possibilities. Data can be combined and visualized multifariously, resulting in views of the integrated biological data. Availability: http://vanted.ipk-gatersleben.de/hive/. Contact: rohn@ipk-gatersleben.de
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spelling pubmed-31173742011-06-17 Creating views on integrated multidomain data Rohn, Hendrik Klukas, Christian Schreiber, Falk Bioinformatics Original Papers Motivation: Modern data acquisition methods in biology allow the procurement of different types of data in increasing quantity, facilitating a comprehensive view of biological systems. As data are usually gathered and interpreted by separate domain scientists, it is hard to grasp multidomain properties and structures. Consequently, there is a need for the integration of biological data from different sources and of different types in one application, providing various visualization approaches. Results: In this article, methods for the integration and visualization of multimodal biological data are presented. This is achieved based on two graphs representing the meta-relations between biological data and the measurement combinations, respectively. Both graphs are linked and serve as different views of the integrated data with navigation and exploration possibilities. Data can be combined and visualized multifariously, resulting in views of the integrated biological data. Availability: http://vanted.ipk-gatersleben.de/hive/. Contact: rohn@ipk-gatersleben.de Oxford University Press 2011-07-01 2011-05-06 /pmc/articles/PMC3117374/ /pubmed/21551150 http://dx.doi.org/10.1093/bioinformatics/btr282 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Papers
Rohn, Hendrik
Klukas, Christian
Schreiber, Falk
Creating views on integrated multidomain data
title Creating views on integrated multidomain data
title_full Creating views on integrated multidomain data
title_fullStr Creating views on integrated multidomain data
title_full_unstemmed Creating views on integrated multidomain data
title_short Creating views on integrated multidomain data
title_sort creating views on integrated multidomain data
topic Original Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117374/
https://www.ncbi.nlm.nih.gov/pubmed/21551150
http://dx.doi.org/10.1093/bioinformatics/btr282
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