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Creating views on integrated multidomain data
Motivation: Modern data acquisition methods in biology allow the procurement of different types of data in increasing quantity, facilitating a comprehensive view of biological systems. As data are usually gathered and interpreted by separate domain scientists, it is hard to grasp multidomain propert...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117374/ https://www.ncbi.nlm.nih.gov/pubmed/21551150 http://dx.doi.org/10.1093/bioinformatics/btr282 |
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author | Rohn, Hendrik Klukas, Christian Schreiber, Falk |
author_facet | Rohn, Hendrik Klukas, Christian Schreiber, Falk |
author_sort | Rohn, Hendrik |
collection | PubMed |
description | Motivation: Modern data acquisition methods in biology allow the procurement of different types of data in increasing quantity, facilitating a comprehensive view of biological systems. As data are usually gathered and interpreted by separate domain scientists, it is hard to grasp multidomain properties and structures. Consequently, there is a need for the integration of biological data from different sources and of different types in one application, providing various visualization approaches. Results: In this article, methods for the integration and visualization of multimodal biological data are presented. This is achieved based on two graphs representing the meta-relations between biological data and the measurement combinations, respectively. Both graphs are linked and serve as different views of the integrated data with navigation and exploration possibilities. Data can be combined and visualized multifariously, resulting in views of the integrated biological data. Availability: http://vanted.ipk-gatersleben.de/hive/. Contact: rohn@ipk-gatersleben.de |
format | Online Article Text |
id | pubmed-3117374 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-31173742011-06-17 Creating views on integrated multidomain data Rohn, Hendrik Klukas, Christian Schreiber, Falk Bioinformatics Original Papers Motivation: Modern data acquisition methods in biology allow the procurement of different types of data in increasing quantity, facilitating a comprehensive view of biological systems. As data are usually gathered and interpreted by separate domain scientists, it is hard to grasp multidomain properties and structures. Consequently, there is a need for the integration of biological data from different sources and of different types in one application, providing various visualization approaches. Results: In this article, methods for the integration and visualization of multimodal biological data are presented. This is achieved based on two graphs representing the meta-relations between biological data and the measurement combinations, respectively. Both graphs are linked and serve as different views of the integrated data with navigation and exploration possibilities. Data can be combined and visualized multifariously, resulting in views of the integrated biological data. Availability: http://vanted.ipk-gatersleben.de/hive/. Contact: rohn@ipk-gatersleben.de Oxford University Press 2011-07-01 2011-05-06 /pmc/articles/PMC3117374/ /pubmed/21551150 http://dx.doi.org/10.1093/bioinformatics/btr282 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Papers Rohn, Hendrik Klukas, Christian Schreiber, Falk Creating views on integrated multidomain data |
title | Creating views on integrated multidomain data |
title_full | Creating views on integrated multidomain data |
title_fullStr | Creating views on integrated multidomain data |
title_full_unstemmed | Creating views on integrated multidomain data |
title_short | Creating views on integrated multidomain data |
title_sort | creating views on integrated multidomain data |
topic | Original Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117374/ https://www.ncbi.nlm.nih.gov/pubmed/21551150 http://dx.doi.org/10.1093/bioinformatics/btr282 |
work_keys_str_mv | AT rohnhendrik creatingviewsonintegratedmultidomaindata AT klukaschristian creatingviewsonintegratedmultidomaindata AT schreiberfalk creatingviewsonintegratedmultidomaindata |